RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 MUC3BQ9H195 1237 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 GREB1Q4ZG55 1949 aa12□□□□□ -0.49
PTPRN-204ENST00000423636 NUP214P35658 2090 aaPredicted RBP12□□□□□ -0.49
PTPRN-204ENST00000423636 MYOCOSA0A1B0GUC4 107 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 KRT87PA6NCN2 255 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 UBXN8O00124 270 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 NVLO15381 856 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 GRID2O43424 1007 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 DNAJA2O60884 412 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ACRP10323 421 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 COX4I1P13073 169 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ITGAXP20702 1163 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CNTFP26441 200 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ADRA1AP35348 466 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CPOXP36551 454 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 RENBPP51606 427 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LBRQ14739 615 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ARMC12Q5T9G4 340 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 MAP3K21Q5TCX8 1036 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 TXNDC8Q6A555 127 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LRRC74BQ6ZQY2 392 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 IRGQQ8WZA9 623 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 FCF1Q9Y324 198 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 TIMM22Q9Y584 194 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 PCDHB12Q9Y5F1 795 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 OAZ2O95190 189 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 TACR2P21452 398 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 HADHAP40939 763 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CASP2P42575 452 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 FOXA1P55317 472 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 C18orf21Q32NC0 220 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 BRMS1LQ5PSV4 323 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 KDELC1Q6UW63 502 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LINC00523Q86TU6 105 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 OR4K2Q8NGD2 314 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ZNF398Q8TD17 642 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ZNF296Q8WUU4 475 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 PCDHAC1Q9H158 963 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 SCML2Q9UQR0 700 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LAMA1P25391 3075 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CCDC189A1A4V9 331 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 NRG2O14511 850 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 MTSS1O43312 755 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ALPIP09923 528 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 FGFR3P22607 806 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 MZF1P28698 734 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ALDH7A1P49419 539 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 RPL14P50914 215 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 EIF4EBP2Q13542 120 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 NFE2Q16621 373 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 STXBP5Q5T5C0 1151 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CYP2R1Q6VVX0 501 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 PTERQ96BW5 349 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 LRCH3Q96II8 777 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 SLC30A3Q99726 388 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 DCLRE1BQ9H816 532 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 SEMA4BQ9NPR2 832 aaPredicted RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 TLR8Q9NR97 1041 aaKnown RBP11.99□□□□□ -0.49
PTPRN-204ENST00000423636 ADA2Q9NZK5 511 aa11.99□□□□□ -0.49
PTPRN-204ENST00000423636 COCHO43405 550 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 NELFEP18615 380 aaKnown RBP11.98□□□□□ -0.49
PTPRN-204ENST00000423636 PIK3R1P27986 724 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 CORO1AP31146 461 aaKnown RBP11.98□□□□□ -0.49
PTPRN-204ENST00000423636 POM121L1PQ3SYA9 428 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 CCDC153Q494R4 210 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 LIPMQ5VYY2 423 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 CLEC14AQ86T13 490 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.98□□□□□ -0.49
PTPRN-204ENST00000423636 ARRDC2Q8TBH0 407 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 FAM110BQ8TC76 370 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 DIS3LQ8TF46 1054 aaKnown RBP11.98□□□□□ -0.49
PTPRN-204ENST00000423636 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 GPR78Q96P69 363 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 YIPF3Q9GZM5 350 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 ATP13A1Q9HD20 1204 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 IKZF3Q9UKT9 509 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 V9GYQ6 96 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 SLC38A8A6NNN8 435 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 H3BMM5 538 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 CHRM3P20309 590 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 DPP6P42658 865 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 AGTR2P50052 363 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 ATP6V0D2Q8N8Y2 350 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 WFDC5Q8TCV5 224 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 ACMSDQ8TDX5 336 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 SEMA6AQ9H2E6 1030 aa11.98□□□□□ -0.49
PTPRN-204ENST00000423636 FBXO44Q9H4M3 255 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms