RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ZNF487B1APH4 448 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 SIGLEC6O43699 453 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 SDC3O75056 442 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PROSCO94903 275 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PIGNO95427 931 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 TMEM253P0C7T8 217 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ELFN1P0C7U0 828 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 CYP2A6P11509 494 aaPredicted RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 IL1R2P27930 398 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 EIF4A3P38919 411 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 MMP12P39900 470 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 SLC25A11Q02978 314 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 PEX6Q13608 980 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 FGL2Q14314 439 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 FZD2Q14332 565 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ELOCQ15369 112 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ZFYVE27Q5T4F4 411 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ESRP1Q6NXG1 681 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 USP45Q70EL2 814 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PROSER1Q86XN7 944 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 CAMK1DQ8IU85 385 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 RAVER1Q8IY67 606 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 NPWQ8N729 165 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ZNF548Q8NEK5 533 aaPredicted RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 FAM71BQ8TC56 605 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ECHDC3Q96DC8 303 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 EXOC2Q96KP1 924 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 NUDCD1Q96RS6 583 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 MGME1Q9BQP7 344 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 NRSN2Q9GZP1 204 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 ABCG4Q9H172 646 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PCDH18Q9HCL0 1135 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PCDH12Q9NPG4 1184 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 SCUBE2Q9NQ36 999 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ABHD10Q9NUJ1 306 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 APOBEC3BQ9UH17 382 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 INTUQ9ULD6 942 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 PHTF1Q9UMS5 762 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 ITM2BQ9Y287 266 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 CA5BQ9Y2D0 317 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
MDC1-204ENST00000422266 MAP1BP46821 2468 aaKnown RBP8.71□□□□□ -1.02
MDC1-204ENST00000422266 LMO7DNF2Z398 122 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 K7ESM1 405 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 PSMD11O00231 422 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 RNF103O00237 685 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 CACNB4O00305 520 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 TRAFD1O14545 582 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 TNFRSF10CO14798 259 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 RAD51BO15315 384 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 INSIG1O15503 277 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 ZW10O43264 779 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 HTRA2O43464 458 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 MAFKO60675 156 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 RASGRP1O95267 797 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 PYGLP06737 847 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 ANXA6P08133 673 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 HOXC4P09017 264 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 C6P13671 934 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 CTSEP14091 401 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 ZFXP17010 805 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 AMPD1P23109 780 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 CCNCP24863 283 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 GARSP41250 739 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 SLC1A1P43005 524 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 MMP13P45452 471 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 LIG3P49916 1009 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 DNAJC3Q13217 504 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 ARHGEF7Q14155 803 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 NR0B2Q15466 257 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 PRRT3Q5FWE3 981 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 HES3Q5TGS1 186 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 GKN2Q86XP6 184 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 VSTM4Q8IW00 320 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 PHACTR4Q8IZ21 702 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 LSMEM2Q8N112 164 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 TP53I13Q8NBR0 393 aaPredicted RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 LMX1AQ8TE12 382 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 CALR3Q96L12 384 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 DEPDC7Q96QD5 511 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 WRAP53Q9BUR4 548 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 MAK16Q9BXY0 300 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 CLCA2Q9UQC9 943 aa8.7□□□□□ -1.02
MDC1-204ENST00000422266 GOLGA4Q13439 2230 aaKnown RBP8.7□□□□□ -1.02
MDC1-204ENST00000422266 TRABD2BA6NFA1 517 aa8.69□□□□□ -1.02
MDC1-204ENST00000422266 SRRM3A6NNA2 597 aaPredicted RBP8.69□□□□□ -1.02
MDC1-204ENST00000422266 AKR1B15C9JRZ8 316 aaPredicted RBP8.69□□□□□ -1.02
MDC1-204ENST00000422266 TRIM38O00635 465 aa8.69□□□□□ -1.02
MDC1-204ENST00000422266 MATN3O15232 486 aa8.69□□□□□ -1.02
MDC1-204ENST00000422266 FFAR2O15552 330 aa8.69□□□□□ -1.02
MDC1-204ENST00000422266 SPINT1O43278 529 aa8.69□□□□□ -1.02
MDC1-204ENST00000422266 BUB1BO60566 1050 aaPredicted RBP8.69□□□□□ -1.02
MDC1-204ENST00000422266 MFAP3LO75121 409 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms