RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 RASSF10A6NK89 507 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 DGKIO75912 1065 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 LDLRAP1Q5SW96 308 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 BHLHB9Q6PI77 547 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 IRF2BP2Q7Z5L9 587 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 LNX1Q8TBB1 728 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 USP6NLQ92738 828 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 GBA3Q9H227 469 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 ATAD3AQ9NVI7 634 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 WRAP73Q9P2S5 460 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 SCOCQ9UIL1 159 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 NR5A2O00482 541 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 HNRNPA1P09651 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PABPC1P11940 636 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 CCNCP24863 283 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PSMA3P25788 255 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 SSTR1P30872 391 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 IL10RBQ08334 325 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 IL27RAQ6UWB1 636 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 SLC41A1Q8IVJ1 513 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 NRSN1Q8IZ57 195 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 MTFMTQ96DP5 389 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 KCTD15Q96SI1 283 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 MRPS33Q9Y291 106 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 NDST3O95803 873 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 RPL21P46778 160 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 NUDT2P50583 147 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PTPRNQ16849 979 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PHF21AQ96BD5 680 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PPP1R37O75864 691 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 LTA4HP09960 611 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 EEF1DP29692 281 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PLIN5Q00G26 463 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PLOD1Q02809 727 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 UPP1Q16831 310 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 BBS12Q6ZW61 710 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 UNKQ9C0B0 810 aaKnown RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 SLC16A1P53985 500 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 WNT3AP56704 352 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 XKR6Q5GH73 641 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 LAYNQ6UX15 382 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 TMEM132CQ8N3T6 1108 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 BAP1Q92560 729 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 COL26A1Q96A83 441 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 THTPAQ9BU02 230 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 EFCAB1Q9HAE3 211 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 EVLQ9UI08 416 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PCDHB11Q9Y5F2 797 aa10.79□□□□□ -0.68
PTCH1-206ENST00000421141 PECAM1P16284 738 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CSTF3Q12996 717 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 NDUFA9Q16795 377 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 RHBDF2Q6PJF5 856 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CDK20Q8IZL9 346 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 P2RY11Q96G91 374 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MRPL48Q96GC5 212 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 FGFBP2Q9BYJ0 223 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 POMKQ9H5K3 350 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TIAM2Q8IVF5 1701 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MAN2B1O00754 1011 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 ADSSP30520 456 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MAT2AP31153 395 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 IRF8Q02556 426 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 HID1Q8IV36 788 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 OVCA2Q8WZ82 227 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 KLHL32Q96NJ5 620 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 SIKE1Q9BRV8 207 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 GLOD4Q9HC38 313 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 EFR3BQ9Y2G0 817 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 ZNF780BQ9Y6R6 833 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 NEMP2A6NFY4 417 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CCDC154A6NI56 674 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 MYO1CO00159 1063 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 GSTA3Q16772 222 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 FNBP1LQ5T0N5 605 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 SELENOMQ8WWX9 145 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TRIT1Q9H3H1 467 aaKnown RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 FBXO6Q9NRD1 293 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PHF24Q9UPV7 400 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 PCDHGA4Q9Y5G9 962 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TRPM7Q96QT4 1865 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 H0Y3Z8 333 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 THRAP10827 490 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TCN1P20061 433 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 BMP6P22004 513 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CRADDP78560 199 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 TMEM164Q5U3C3 297 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 WDR93Q6P2C0 686 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CLEC20AQ6ZU45 233 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CHMP1BQ7LBR1 199 aa10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CIR1Q86X95 450 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-206ENST00000421141 CFAP206Q8IYR0 622 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms