RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CARD16Q5EG05 197 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 SETD3Q86TU7 594 aaPredicted RBP9.08□□□□□ -0.96
TRIM39-206ENST00000420746 SLC47A2Q86VL8 602 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 RBMXL3Q8N7X1 1067 aaKnown RBP9.08□□□□□ -0.96
TRIM39-206ENST00000420746 ST6GALNAC3Q8NDV1 305 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 OR56A4Q8NGH8 313 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 OSBPL1AQ9BXW6 950 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 TRIM8Q9BZR9 551 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 CHST11Q9NPF2 352 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 ACSS2Q9NR19 701 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 ASF1BQ9NVP2 202 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 LUZP4Q9P127 313 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 KIAA1257Q9ULG3 409 aa9.08□□□□□ -0.96
TRIM39-206ENST00000420746 G3BP2Q9UN86 482 aaKnown RBP9.08□□□□□ -0.96
TRIM39-206ENST00000420746 PIPSLA2A3N6 862 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 FAM221AA4D161 298 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 C21orf140B9A014 251 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 H3BQV1 296 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 LRRTM2O43300 516 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 KRT86O43790 486 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ZG16O60844 167 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 MMP20O60882 483 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 CD2BP2O95400 341 aaKnown RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 RHOCP08134 193 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 HOXC4P09017 264 aaPredicted RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 BPIP17213 487 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 KELP23276 732 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 SSTR2P30874 369 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 CLCN1P35523 988 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 KIAA1024LP59773 190 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 PEX6Q13608 980 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 AUHQ13825 339 aaKnown RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 TSR1Q2NL82 804 aaKnown RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 WSCD2Q2TBF2 565 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 RETSATQ6NUM9 610 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 PMF1Q6P1K2 205 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 FOXR2Q6PJQ5 311 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 WDR74Q6RFH5 385 aaPredicted RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 LCLAT1Q6UWP7 414 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 C6orf15Q6UXA7 325 aaPredicted RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 BRAPQ7Z569 592 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 CDH24Q86UP0 819 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 UBA3Q8TBC4 463 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 CLEC4CQ8WTT0 213 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 OR1E3Q8WZA6 343 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ISG20Q96AZ6 181 aaKnown RBP9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ULBP3Q9BZM4 244 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM168Q9H0V1 697 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 ING2Q9H160 280 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 CUEDC2Q9H467 287 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 APMAPQ9HDC9 416 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM9Q9P0T7 183 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 COPG2Q9UBF2 871 aa9.07□□□□□ -0.96
TRIM39-206ENST00000420746 GOLGA6L3A6NEY3 463 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 KATNA1O75449 491 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 FGF1P05230 155 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 CCNB1P14635 433 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 MPSTP25325 297 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 CASP14P31944 242 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 CCR1P32246 355 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 GARSP41250 739 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 STAT1P42224 750 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 RGS7P49802 495 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 IRAK1P51617 712 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 SUOXP51687 545 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 VAMP7P51809 220 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 NDST2P52849 883 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 IRX6P78412 446 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 BIRC2Q13490 618 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 INPP5AQ14642 412 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 UGT8Q16880 541 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 SYPL2Q5VXT5 272 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 NKAIN2Q5VXU1 208 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 CPZQ66K79 652 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 KCTD16Q68DU8 428 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 ZNF783Q6ZMS7 281 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 UNC13DQ70J99 1090 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 INTS8Q75QN2 995 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 FAM149B1Q96BN6 582 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 STAMBPL1Q96FJ0 436 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 TMUB1Q9BVT8 246 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 REPIN1Q9BWE0 567 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 ZDHHC6Q9H6R6 413 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 TMEM8AQ9HCN3 771 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 FGF22Q9HCT0 170 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 SPATS2LQ9NUQ6 558 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 SIDT1Q9NXL6 827 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 HECAQ9UBI9 543 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 VANGL2Q9ULK5 521 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 FRMD4BQ9Y2L6 1034 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 OR1A2Q9Y585 309 aa9.06□□□□□ -0.96
TRIM39-206ENST00000420746 MORC2Q9Y6X9 1032 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 TNRC6AQ8NDV7 1962 aaKnown RBP9.06□□□□□ -0.96
TRIM39-206ENST00000420746 A0A1B0GUH1 482 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 SSU72P8A0A1W2PR75 194 aa9.05□□□□□ -0.96
TRIM39-206ENST00000420746 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms