RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 BRAT1Q6PJG6 821 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 SPEM1Q8N4L4 309 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 ZCCHC9Q8N567 271 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 EIF1ADQ8N9N8 165 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 DNAAF3Q8N9W5 541 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 ADGRE3Q9BY15 652 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 FRMD8Q9BZ67 464 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 FOXP3Q9BZS1 431 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 XAB2Q9HCS7 855 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 POLMQ9NP87 494 aaPredicted RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 DLGAP2Q9P1A6 1054 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 RAB21Q9UL25 225 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 NFU1Q9UMS0 254 aa12.57□□□□□ -0.4
TMEM53-206ENST00000420706 RPL26L1Q9UNX3 145 aaKnown RBP12.57□□□□□ -0.4
TMEM53-206ENST00000420706 A0A0J9YYE9 177 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 TCRBV21S2A2A0A5A6 115 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 TMEM221A6NGB7 291 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 M0R296 226 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 AP3B1O00203 1094 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MID1O15344 667 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 PPFIA2O75334 1257 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 ADH1BP00325 375 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 CPP00450 1065 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 TRBC1P01850 177 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 TUBBP07437 444 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MYBL2P10244 700 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 C5AR1P21730 350 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 ITGB7P26010 798 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MAGEA3P43357 314 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MAGEA9P43362 315 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 DGKEP52429 567 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 EPHB1P54762 984 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 ARL4CP56559 192 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 ELF2Q15723 593 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 UGP2Q16851 508 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 CERCAMQ5T4B2 595 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 PARS2Q7L3T8 475 aaKnown RBP12.56□□□□□ -0.4
TMEM53-206ENST00000420706 TTC7BQ86TV6 843 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 NDUFAF2Q8N183 169 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 PAF1Q8N7H5 531 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 SIPA1Q96FS4 1042 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 PPP1R16AQ96I34 528 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MRGPRX1Q96LB2 322 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 SIGLEC10Q96LC7 697 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 SMIM14Q96QK8 99 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 SLC6A17Q9H1V8 727 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
TMEM53-206ENST00000420706 BFARQ9NZS9 450 aa12.56□□□□□ -0.4
TMEM53-206ENST00000420706 MTRF1LQ9UGC7 380 aaKnown RBP12.56□□□□□ -0.4
TMEM53-206ENST00000420706 VCANP13611 3396 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 SDR42E2A6NKP2 422 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 E7ESA3 106 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 PLK4O00444 970 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 DNTTP04053 509 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 PRKCGP05129 697 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 CTPS1P17812 591 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 GABRG2P18507 467 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 NDUFV2P19404 249 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 AOC1P19801 751 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MCM3P25205 808 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MGAT1P26572 445 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 DRD3P35462 400 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 HNF1BP35680 557 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 GRIA4P48058 902 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 SESN2P58004 480 aaPredicted RBP12.55□□□□□ -0.4
TMEM53-206ENST00000420706 ZBTB16Q05516 673 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MTAPQ13126 283 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MTM1Q13496 603 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 PTPRRQ15256 657 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MSS51Q4VC12 460 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 ERN2Q76MJ5 926 aaKnown RBP12.55□□□□□ -0.4
TMEM53-206ENST00000420706 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 AGGF1Q8N302 714 aaeCLIP12.55□□□□□ -0.4
TMEM53-206ENST00000420706 AADATQ8N5Z0 425 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 SCRN2Q96FV2 425 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 IER2Q9BTL4 223 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 HDAC8Q9BY41 377 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 PABPC3Q9H361 631 aaKnown RBP12.55□□□□□ -0.4
TMEM53-206ENST00000420706 MAGEE1Q9HCI5 957 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 DYRK4Q9NR20 520 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 SCML1Q9UN30 329 aa12.55□□□□□ -0.4
TMEM53-206ENST00000420706 UPK3BL1B0FP48 263 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 UPK3BL2E5RIL1 263 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 BANF1O75531 89 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 ALPIP09923 528 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 FAM153BP0C7A2 387 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 PIRTP0C851 137 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 ADRB3P13945 408 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 XPAP23025 273 aaPredicted RBP12.54□□□□□ -0.4
TMEM53-206ENST00000420706 ABL2P42684 1182 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 SUOXP51687 545 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 CLCN5P51795 746 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 NEK3P51956 506 aa12.54□□□□□ -0.4
TMEM53-206ENST00000420706 CNTN1Q12860 1018 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms