RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DTLQ9NZJ0 730 aa20.46■□□□□ 0.87
GTF3A-202ENST00000419181 EPN1Q9Y6I3 576 aaPredicted RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 TDRD6O60522 2096 aaKnown RBP20.46■□□□□ 0.87
GTF3A-202ENST00000419181 A0A0A6YYK5 440 aaPredicted RBP20.45■□□□□ 0.86
GTF3A-202ENST00000419181 SPTY2D1-AS1A0A0U1RR47 76 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 MATN3O15232 486 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 TNFSF14O43557 240 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 SPOPO43791 374 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 KRT1P04264 644 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 C6P13671 934 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 SPINK2P20155 84 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 MX2P20592 715 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 CCNCP24863 283 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 IGFALSP35858 605 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 NOP2P46087 812 aaKnown RBP20.45■□□□□ 0.86
GTF3A-202ENST00000419181 RALGDSQ12967 914 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 SLC9A4Q6AI14 798 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 SLCO6A1Q86UG4 719 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 HDAC11Q96DB2 347 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 NT5MQ9NPB1 228 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 DDX56Q9NY93 547 aaKnown RBP20.45■□□□□ 0.86
GTF3A-202ENST00000419181 APOBEC2Q9Y235 224 aaKnown RBP20.45■□□□□ 0.86
GTF3A-202ENST00000419181 PCDHGC4Q9Y5F7 938 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 ALG6Q9Y672 507 aa20.45■□□□□ 0.86
GTF3A-202ENST00000419181 A0A1W2PQ67 120 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 CFAP69A5D8W1 941 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 HYAL3O43820 417 aaPredicted RBP20.44■□□□□ 0.86
GTF3A-202ENST00000419181 SDC3O75056 442 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 DKK1O94907 266 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 ATXN1LP0C7T5 689 aaKnown RBP20.44■□□□□ 0.86
GTF3A-202ENST00000419181 LIG3P49916 1009 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 SEMG2Q02383 582 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 TRAF2Q12933 501 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 FZD2Q14332 565 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 AGERQ15109 404 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 TPRG1LQ5T0D9 272 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 ALG1LQ6GMV1 187 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 DPPA4Q7L190 304 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 RAB44Q7Z6P3 723 aaPredicted RBP20.44■□□□□ 0.86
GTF3A-202ENST00000419181 PAF1Q8N7H5 531 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 ADAMTS14Q8WXS8 1223 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 SCNM1Q9BWG6 230 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
GTF3A-202ENST00000419181 GOLPH3Q9H4A6 298 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 MBNL1Q9NR56 388 aaKnown RBP20.44■□□□□ 0.86
GTF3A-202ENST00000419181 FTSJ1Q9UET6 329 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 COQ6Q9Y2Z9 468 aa20.44■□□□□ 0.86
GTF3A-202ENST00000419181 PSTPIP1O43586 416 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 TNNT1P13805 278 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 DGKAP23743 735 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 CDC25BP30305 580 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 PDE1CQ14123 709 aaPredicted RBP20.43■□□□□ 0.86
GTF3A-202ENST00000419181 IRF4Q15306 451 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 C11orf63Q6NUN7 778 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 RAD9BQ6WBX8 426 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 PARGQ86W56 976 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 EID2Q8N6I1 236 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 PNPLA1Q8N8W4 532 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.43■□□□□ 0.86
GTF3A-202ENST00000419181 LRRN4Q8WUT4 740 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 RNF25Q96BH1 459 aaPredicted RBP20.43■□□□□ 0.86
GTF3A-202ENST00000419181 ZNF830Q96NB3 372 aaPredicted RBP20.43■□□□□ 0.86
GTF3A-202ENST00000419181 SEMA3CQ99985 751 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 CAAP1Q9H8G2 361 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 AMACRQ9UHK6 382 aa20.43■□□□□ 0.86
GTF3A-202ENST00000419181 REXO2Q9Y3B8 237 aaKnown RBP20.43■□□□□ 0.86
GTF3A-202ENST00000419181 RCCD1A6NED2 376 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 TOR1BO14657 336 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 APOL1O14791 398 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 PIAS2O75928 621 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 CCNB1P14635 433 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 NME1P15531 152 aaKnown RBP20.42■□□□□ 0.86
GTF3A-202ENST00000419181 YPEL5P62699 121 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 PPIDQ08752 370 aaKnown RBP20.42■□□□□ 0.86
GTF3A-202ENST00000419181 LRRC14Q15048 493 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 TAZQ16635 292 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 WSCD2Q2TBF2 565 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 MFSD7Q6UXD7 560 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 LIPIQ6XZB0 460 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 SLC25A45Q8N413 288 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 CHCHD4Q8N4Q1 142 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 PDCD6IPQ8WUM4 868 aaKnown RBP20.42■□□□□ 0.86
GTF3A-202ENST00000419181 LGMNQ99538 433 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 RBM22Q9NW64 420 aaKnown RBP eCLIP20.42■□□□□ 0.86
GTF3A-202ENST00000419181 DNAJC28Q9NX36 388 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 B4GALT6Q9UBX8 382 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 SALL4Q9UJQ4 1053 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 HEY1Q9Y5J3 304 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 AKAP13Q12802 2813 aa20.42■□□□□ 0.86
GTF3A-202ENST00000419181 MAP1BP46821 2468 aaKnown RBP20.42■□□□□ 0.86
GTF3A-202ENST00000419181 LZTS3O60299 673 aaPredicted RBP20.41■□□□□ 0.86
GTF3A-202ENST00000419181 PGLSO95336 258 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 IPO7O95373 1038 aaKnown RBP20.41■□□□□ 0.86
GTF3A-202ENST00000419181 CPP00450 1065 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 CSF2P04141 144 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 ELFN1P0C7U0 828 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 ZFXP17010 805 aaPredicted RBP20.41■□□□□ 0.86
GTF3A-202ENST00000419181 CDKN2BP42772 138 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 ST3GAL2Q16842 350 aa20.41■□□□□ 0.86
GTF3A-202ENST00000419181 ODF2Q5BJF6 829 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms