RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 MUC22E2RYF6 1773 aaPredicted RBP13.88□□□□□ -0.19
CHMP5-202ENST00000419016 KAT7O95251 611 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PIGNO95427 931 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SLC8A1P32418 973 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 NNMTP40261 264 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 GRIA2P42262 883 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 ACVR1Q04771 509 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 LEXMQ3ZCV2 418 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 TSTD2Q5T7W7 516 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 LRRC6Q86X45 466 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 CYP4X1Q8N118 509 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 RIBC1Q8N443 379 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SLC44A3Q8N4M1 653 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 CHST14Q8NCH0 376 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 LPCAT1Q8NF37 534 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 CERS2Q96G23 380 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SMIM14Q96QK8 99 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PAFAH2Q99487 392 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SLC2A6Q9UGQ3 507 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 RIMKLBQ9ULI2 386 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PLA2G4CQ9UP65 541 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 MYLKQ15746 1914 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 GOLGA6L10A6NI86 522 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SMIM23A6NLE4 172 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 POC1B-GALNT4F8VUJ3 575 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 RNF40O75150 1001 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PRKCGP05129 697 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 CHRM1P11229 460 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SERPINA4P29622 427 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SOX9P48436 509 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 MGAT5Q09328 741 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SKIV2LQ15477 1246 aaKnown RBP13.87□□□□□ -0.19
CHMP5-202ENST00000419016 CNGA3Q16281 694 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 ARMC12Q5T9G4 340 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 NLRP9Q7RTR0 991 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 ZSWIM9Q86XI8 627 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 KRT222Q8N1A0 295 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 OR13J1Q8NGT2 312 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PEX13Q92968 403 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 ZNF641Q96N77 438 aaPredicted RBP13.87□□□□□ -0.19
CHMP5-202ENST00000419016 SUV39H2Q9H5I1 410 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 PPIL1Q9Y3C6 166 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 WASF2Q9Y6W5 498 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 ANKRD36A6QL64 1941 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 COL4A2P08572 1712 aa13.87□□□□□ -0.19
CHMP5-202ENST00000419016 TBC1D3BA6NDS4 549 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 ANTXRLA6NF34 631 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 HMGB1P1B2RPK0 211 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 RGS16O15492 202 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 PIRTP0C851 137 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 ERVK-10P10266 1014 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 OAS2P29728 719 aaKnown RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 GRIA4P48058 902 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 GRM3Q14832 879 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 PREPLQ4J6C6 727 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 KIAA0930Q6ICG6 404 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 MARK2Q7KZI7 788 aaKnown RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 RMDN1Q96DB5 314 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 MTG2Q9H4K7 406 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.86□□□□□ -0.192e-6■■■■□ 20.2
CHMP5-202ENST00000419016 IL1RAPL1Q9NZN1 696 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 THAP10Q9P2Z0 257 aaPredicted RBP13.86□□□□□ -0.19
CHMP5-202ENST00000419016 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 KCTD3Q9Y597 815 aa13.86□□□□□ -0.19
CHMP5-202ENST00000419016 AURKAO14965 403 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 UGT1A9O60656 530 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 SIN3BO75182 1162 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 GALK1P51570 392 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 ST8SIA6P61647 398 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 NAB1Q13506 487 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 LAMB3Q13751 1172 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 ENPP2Q13822 863 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 SEPT6Q14141 434 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 ZNF234Q14588 700 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 PTPRRQ15256 657 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 CDKN3Q16667 212 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 HNRNPA1L2Q32P51 320 aaKnown RBP13.85□□□□□ -0.19
CHMP5-202ENST00000419016 C9orf64Q5T6V5 341 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 TEDDM1Q5T9Z0 273 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 KCTD16Q68DU8 428 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 SLC26A11Q86WA9 606 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 SUGP1Q8IWZ8 645 aaKnown RBP13.85□□□□□ -0.19
CHMP5-202ENST00000419016 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
CHMP5-202ENST00000419016 TTC30BQ8N4P2 665 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 CSGALNACT1Q8TDX6 532 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 MZB1Q8WU39 189 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 PDCD6IPQ8WUM4 868 aaKnown RBP13.85□□□□□ -0.19
CHMP5-202ENST00000419016 PPM1EQ8WY54 764 aa13.85□□□□□ -0.19
CHMP5-202ENST00000419016 HEPHQ9BQS7 1158 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms