RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 SLC35G2Q8TBE7 412 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 NSMCE3Q96MG7 304 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 NUDCD1Q96RS6 583 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 ZNF670Q9BS34 389 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 COQ6Q9Y2Z9 468 aa16.59■□□□□ 0.25
LINC00404-201ENST00000418660 A0A1W2PQ67 120 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 SCAMP1O15126 338 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 PRKCGP05129 697 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 GIMD1P0DJR0 217 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 ALPPL2P10696 532 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 ACP1P24666 158 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 LIG3P49916 1009 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 EIF2B5Q13144 721 aaKnown RBP16.58■□□□□ 0.24
LINC00404-201ENST00000418660 MESDQ14696 234 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 IRF4Q15306 451 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 WSCD2Q2TBF2 565 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 RALGPS1Q5JS13 557 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 NCBP2-AS2Q69YL0 99 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 TMPRSS12Q86WS5 348 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 MGME1Q9BQP7 344 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 TRIM5Q9C035 493 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 CAAP1Q9H8G2 361 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 NLGN3Q9NZ94 848 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 KLF15Q9UIH9 416 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 ZMIZ1Q9ULJ6 1067 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 CSNK1G3Q9Y6M4 447 aa16.58■□□□□ 0.24
LINC00404-201ENST00000418660 TTC24A2A3L6 582 aaPredicted RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 TMEM110-MUSTN1A8MSY1 372 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 FFAR2O15552 330 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 HTRA2O43464 458 aaPredicted RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 MFSD11O43934 449 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 LZTS3O60299 673 aaPredicted RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 SOCS5O75159 536 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 MTA2O94776 668 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 JUNDP17535 347 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 GARSP41250 739 aaKnown RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 MMP13P45452 471 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 SEMG2Q02383 582 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 GALNT2Q10471 571 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 RALGDSQ12967 914 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 TEX26Q8N6G2 289 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 BTN2A2Q8WVV5 523 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 ZCCHC14Q8WYQ9 949 aaKnown RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 FAF2Q96CS3 445 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 DUSP23Q9BVJ7 150 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 NOD2Q9HC29 1040 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 INTUQ9ULD6 942 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 PCDHGC4Q9Y5F7 938 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 EPG5Q9HCE0 2579 aa16.57■□□□□ 0.24
LINC00404-201ENST00000418660 MAP1BP46821 2468 aaKnown RBP16.57■□□□□ 0.24
LINC00404-201ENST00000418660 CAPNS1P04632 268 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 KDELR1P24390 212 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 PEX5P50542 639 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 MAXP61244 160 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 DAB2P98082 770 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 TCEAL1Q15170 157 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 IFI16Q16666 785 aaKnown RBP16.56■□□□□ 0.24
LINC00404-201ENST00000418660 ZFYVE27Q5T4F4 411 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 TIGD7Q6NT04 549 aaPredicted RBP16.56■□□□□ 0.24
LINC00404-201ENST00000418660 LIPIQ6XZB0 460 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 MACC1Q6ZN28 852 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 DPPA4Q7L190 304 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 FAM181AQ8N9Y4 354 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 ZNF548Q8NEK5 533 aaPredicted RBP16.56■□□□□ 0.24
LINC00404-201ENST00000418660 RFFLQ8WZ73 363 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 TSGA13Q96PP4 275 aa16.56■□□□□ 0.24
LINC00404-201ENST00000418660 PTPRBP23467 1997 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 FAM149AA5PLN7 773 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 K7ESM1 405 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 MATN3O15232 486 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 AQP9O43315 295 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 ELFN1P0C7U0 828 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 CKMT1AP12532 417 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 CCNCP24863 283 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 MTM1Q13496 603 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 INPP5AQ14642 412 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 MARCH9Q86YJ5 346 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 PHACTR4Q8IZ21 702 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 PQLC3Q8N755 202 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 TC2NQ8N9U0 490 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 LMX1AQ8TE12 382 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 PDCD6IPQ8WUM4 868 aaKnown RBP16.55■□□□□ 0.24
LINC00404-201ENST00000418660 RAPGEF5Q92565 580 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 MAML1Q92585 1016 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 FATE1Q969F0 183 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 APOLD1Q96LR9 279 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 TBATAQ96M53 351 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 RNF157Q96PX1 679 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 APOOQ9BUR5 198 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 NT5MQ9NPB1 228 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 SPASTQ9UBP0 616 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 PHTF1Q9UMS5 762 aa16.55■□□□□ 0.24
LINC00404-201ENST00000418660 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
LINC00404-201ENST00000418660 ZNF487B1APH4 448 aa16.54■□□□□ 0.24
LINC00404-201ENST00000418660 TPP1O14773 563 aa16.54■□□□□ 0.24
LINC00404-201ENST00000418660 KRT37O76014 449 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms