RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CYP2S1Q96SQ9 504 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 MRPL57Q9BQC6 102 aaKnown RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 IGSF5Q9NSI5 407 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 AP4S1Q9Y587 144 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 A0A0U1RQS6 177 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 CASQ2O14958 399 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 TADA2AO75478 443 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 EFEMP1Q12805 493 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 LAMB3Q13751 1172 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 PSMD5Q16401 504 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 MYLK3Q32MK0 819 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 SLC39A12Q504Y0 691 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 ALFQ53S48 1182 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 RAB41Q5JT25 222 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 HECTD2Q5U5R9 776 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 PM20D1Q6GTS8 502 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 ZBTB46Q86UZ6 589 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-202ENST00000418310 PSMG2Q969U7 264 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 HMCESQ96FZ2 354 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 TBATAQ96M53 351 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 SP110Q9HB58 689 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 CACNA2D2Q9NY47 1150 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 VTI1BQ9UEU0 232 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 HS3ST4Q9Y661 456 aa11.96□□□□□ -0.49
LIMK1-202ENST00000418310 C7orf72A4D263 438 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 PDLIM1O00151 329 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 UBFD1O14562 309 aaKnown RBP11.96□□□□□ -0.5
LIMK1-202ENST00000418310 MATN3O15232 486 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 IPO13O94829 963 aaKnown RBP11.96□□□□□ -0.5
LIMK1-202ENST00000418310 ODC1P11926 461 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 THPOP40225 353 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 PIWIL4Q7Z3Z4 852 aaKnown RBP11.96□□□□□ -0.5
LIMK1-202ENST00000418310 HERC6Q8IVU3 1022 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 RDH11Q8TC12 318 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 TMIGD2Q96BF3 282 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 CNDP1Q96KN2 507 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 EXOC2Q96KP1 924 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 FCRL5Q96RD9 977 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 MCMBPQ9BTE3 642 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 SLC38A7Q9NVC3 462 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 OSER1Q9NX31 292 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 NSMCE4AQ9NXX6 385 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 UXTQ9UBK9 157 aaPredicted RBP11.96□□□□□ -0.5
LIMK1-202ENST00000418310 FAM50BQ9Y247 325 aa11.96□□□□□ -0.5
LIMK1-202ENST00000418310 TRPC5OSA6NMA1 111 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 H3BSA7 217 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PLOD2O00469 737 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TRIM38O00635 465 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 MGEA5O60502 916 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 CLIC3O95833 236 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 FAM58BPP0C7Q3 252 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 CCNCP24863 283 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 HCAR3P49019 387 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 FOXA1P55317 472 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 ADAM17P78536 824 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 IHHQ14623 411 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PFKFB4Q16877 469 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 VPS26BQ4G0F5 336 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TECRLQ5HYJ1 363 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 INTS6LQ5JSJ4 861 aaKnown RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 KRT80Q6KB66 452 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 KLC3Q6P597 504 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 KLHDC10Q6PID8 442 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TMEM207Q6UWW9 146 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 NUP93Q8N1F7 819 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 HIC2Q96JB3 615 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TMEM79Q9BSE2 394 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 CATSPERBQ9H7T0 1116 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 ARL5AQ9Y689 179 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 ARHGEF37A1IGU5 675 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 HEATR9A2RTY3 570 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 SCAMP3O14828 347 aaKnown RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 BCAS2O75934 225 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 RTN3O95197 1032 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 LTA4HP09960 611 aaKnown RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PSMC3P17980 439 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 MRPS6P82932 125 aaKnown RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PLOD1Q02809 727 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 MGAT5BQ3V5L5 792 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 FUT11Q495W5 492 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 AGAP9Q5VTM2 703 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 GDF6Q6KF10 455 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 SETD3Q86TU7 594 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TTC9BQ8N6N2 239 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TRIML2Q8N7C3 387 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 C2CD4AQ8NCU7 369 aaPredicted RBP11.95□□□□□ -0.5
LIMK1-202ENST00000418310 OR13C4Q8NGS5 318 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 ZFP28Q8NHY6 868 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 BTBD9Q96Q07 612 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 TRAF6Q9Y4K3 522 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
LIMK1-202ENST00000418310 UBXN8O00124 270 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms