RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 HPDLQ96IR7 371 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 SNX22Q96L94 193 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 FAM81BQ96LP2 452 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 UROC1Q96N76 676 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 PPP1R9BQ96SB3 815 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 PI4K2AQ9BTU6 479 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TEX101Q9BY14 249 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MRPL9Q9BYD2 267 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TTYH3Q9C0H2 523 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 MS4A7Q9GZW8 240 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 KLC2Q9H0B6 622 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 GANQ9H2C0 597 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 APOBEC3GQ9HC16 384 aaKnown RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 ARFGAP3Q9NP61 516 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 UBE2TQ9NPD8 197 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 TBC1D13Q9NVG8 400 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 AURKAIP1Q9NWT8 199 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 VSX1Q9NZR4 365 aaPredicted RBP6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CEP72Q9P209 647 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 HESX1Q9UBX0 185 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 RAPGEFL1Q9UHV5 662 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 FBXL5Q9UKA1 691 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 DNAJC12Q9UKB3 198 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CAPN11Q9UMQ6 739 aa6.18□□□□□ -1.42
NIFKP3-201ENST00000417799 CITO14578 2027 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 CASTOR2A6NHX0 329 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 AHRRA9YTQ3 701 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 AKR1B15C9JRZ8 316 aaPredicted RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 PODXLO00592 558 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 PPEF2O14830 753 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ERN1O75460 977 aaKnown RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 DDHD2O94830 711 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 MT-ND5P03915 603 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 GYPCP04921 128 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ANXA2P07355 339 aaKnown RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 P4HA1P13674 534 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 PNPLA4P41247 253 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 VIPR2P41587 438 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 TAF6P49848 677 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 CLCNKBP51801 687 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 MFAP3P55082 362 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 LILRA4P59901 499 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZBED6P86452 979 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 GCNT1Q02742 428 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 OCA2Q04671 838 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 RNASELQ05823 741 aaKnown RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 UPP1Q16831 310 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 FBLN7Q53RD9 439 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 RABL3Q5HYI8 236 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF667Q5HYK9 610 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 DGKKQ5KSL6 1271 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 SPOPLQ6IQ16 392 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 GJB7Q6PEY0 223 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 DCLRE1AQ6PJP8 1040 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 RRAGAQ7L523 313 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ENOSF1Q7L5Y1 443 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 CCDC186Q7Z3E2 898 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 CACNA2D4Q7Z3S7 1137 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF280BQ86YH2 543 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 TMPRSS6Q8IU80 811 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 CNGA4Q8IV77 575 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ARHGEF19Q8IW93 802 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 LRRC52Q8N7C0 313 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF397Q8NF99 534 aaPredicted RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 KIAA1191Q96A73 305 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF689Q96CS4 500 aaPredicted RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 LRIG1Q96JA1 1093 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ZNF560Q96MR9 790 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 MOGAT1Q96PD6 335 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 SELENOOQ9BVL4 669 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 STK33Q9BYT3 514 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 VPS11Q9H270 941 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 MTIF3Q9H2K0 278 aaKnown RBP6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 GPRC5BQ9NZH0 403 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ITGB1BP2Q9UKP3 347 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 MYO6Q9UM54 1294 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 ANK1P16157 1881 aa6.17□□□□□ -1.42
NIFKP3-201ENST00000417799 DNAH12Q6ZR08 3092 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 A0A1W2PPC4 97 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 KPNA7A9QM74 516 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 MUSKO15146 869 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 RASSF9O75901 435 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 FGF18O76093 207 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 GJB5O95377 273 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PTMAP06454 111 aaKnown RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CHRM3P20309 590 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 ABCB4P21439 1286 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 PAX3P23760 479 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 KRT9P35527 623 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 MAGEA10P43363 369 aaPredicted RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CARSP49589 748 aaKnown RBP6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 WNT3P56703 355 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 GSDMDP57764 484 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 TNNC1P63316 161 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 GOLGA8FQ08AF8 430 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 GOLGA8DPQ0D2H9 430 aa6.16□□□□□ -1.42
NIFKP3-201ENST00000417799 CUL2Q13617 745 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms