RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TEX12Q9BXU0 123 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 UNKQ9C0B0 810 aaKnown RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 RGS18Q9NS28 235 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.89□□□□□ -0.354e-8■■■■□ 26.1
SCAF8-203ENST00000417268 ZMYM5Q9UJ78 669 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 SLC12A4Q9UP95 1085 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PTPRJQ12913 1337 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 YJEFN3A6XGL0 299 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 MRASO14807 208 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PPEF2O14830 753 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 MTA2O94776 668 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 C1RP00736 705 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 OR56A5P0C7T3 313 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PBLDP30039 288 aaPredicted RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 LRPAP1P30533 357 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 TTKP33981 857 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 SCNN1AP37088 669 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 CSHL1Q14406 222 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 NOMO1Q15155 1222 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 TAF5Q15542 800 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 CCDC153Q494R4 210 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 CFAP52Q8N1V2 620 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 ARL10Q8N8L6 244 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 P2RY11Q96G91 374 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 RIPOR3Q96MK2 946 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 CEP44Q9C0F1 390 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 TRIM45Q9H8W5 580 aaPredicted RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 DMTF1Q9Y222 760 aa12.89□□□□□ -0.35
SCAF8-203ENST00000417268 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
SCAF8-203ENST00000417268 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 STAU1O95793 577 aaKnown RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 MPOP05164 745 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 TPBGLP0DKB5 382 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 SLC11A1P49279 550 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 HADHBP55084 474 aaKnown RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 USP46P62068 366 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 SETMARQ53H47 684 aaPredicted RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 FAM46CQ5VWP2 391 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CLEC20AQ6ZU45 233 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 TAS1R3Q7RTX0 852 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 ARHGEF3Q9NR81 526 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 COG5Q9UP83 839 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 LDLRP01130 860 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CRABP2P29373 138 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CDK7P50613 346 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 IL5RAQ01344 420 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 FASTKQ14296 549 aaKnown RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CHPFQ8IZ52 775 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CPA6Q8N4T0 437 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 NAT14Q8WUY8 206 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CAPSLQ8WWF8 208 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CACNG4Q9UBN1 327 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 HMGXB4Q9UGU5 601 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CLCA2Q9UQC9 943 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 KCNU1A8MYU2 1149 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PRR5-ARHGAP8B1AHC4 643 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 E9PAM4 449 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 TAF4O00268 1085 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 SOX6P35712 828 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 ARHGAP8P85298 464 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CEP78Q5JTW2 689 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 RINLQ6ZS11 566 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PHACTR4Q8IZ21 702 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 NMUR2Q9GZQ4 415 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 VPS45Q9NRW7 570 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 UBAP1Q9NZ09 502 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 A0A096LPK6 155 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 A0A1B0GVM2 712 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 TCAF2A6NFQ2 919 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 BAIAP3O94812 1187 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 COX4I1P13073 169 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 RAD23AP54725 363 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 B3GNT9Q6UX72 402 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 LEMD2Q8NC56 503 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CLPTM1LQ96KA5 538 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 GPR88Q9GZN0 384 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 C6orf62Q9GZU0 229 aaPredicted RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 AGO3Q9H9G7 860 aaKnown RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 CPQQ9Y646 472 aa12.88□□□□□ -0.35
SCAF8-203ENST00000417268 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
SCAF8-203ENST00000417268 GRM6O15303 877 aa12.87□□□□□ -0.35
SCAF8-203ENST00000417268 SERPINA6P08185 405 aa12.87□□□□□ -0.35
SCAF8-203ENST00000417268 IQCF3P0C7M6 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms