RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 NR1H3Q13133 447 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 CTBP1Q13363 440 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 FRG1Q14331 258 aaKnown RBP17.08■□□□□ 0.33
CALD1-204ENST00000417172 DLG2Q15700 870 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 ETFBKMTQ8IXQ9 262 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 AHI1Q8N157 1196 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 ZNF366Q8N895 744 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.08■□□□□ 0.33
CALD1-204ENST00000417172 OR2AP1Q8NGE2 309 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 NXPE3Q969Y0 559 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 DNAJC1Q96KC8 554 aaKnown RBP17.08■□□□□ 0.33
CALD1-204ENST00000417172 SMC6Q96SB8 1091 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 RABEP2Q9H5N1 569 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 SUDS3Q9H7L9 328 aaPredicted RBP17.08■□□□□ 0.33
CALD1-204ENST00000417172 ECT2Q9H8V3 914 aa17.08■□□□□ 0.33
CALD1-204ENST00000417172 FZD6O60353 706 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 NFATC1O95644 943 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 IGSF6O95976 241 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 MT-ND3P03897 115 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 SNRPAP09012 282 aaKnown RBP17.08■□□□□ 0.32
CALD1-204ENST00000417172 ALPIP09923 528 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 PYGBP11216 843 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 CTPS1P17812 591 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 POLR2EP19388 210 aaKnown RBP17.08■□□□□ 0.32
CALD1-204ENST00000417172 CES1P23141 567 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 GMPRP36959 345 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 ABL2P42684 1182 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 AP1S1P61966 158 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 MPP1Q00013 466 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 QPCTQ16769 361 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 PDPK2PQ6A1A2 396 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 ZSWIM9Q86XI8 627 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 ACVR1CQ8NER5 493 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 MRGPRX3Q96LB0 322 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 SLC2A11Q9BYW1 496 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 ERVW-1Q9UQF0 538 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 ACTL7BQ9Y614 415 aa17.08■□□□□ 0.32
CALD1-204ENST00000417172 TICRRQ7Z2Z1 1910 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 TTC34A8MYJ7 566 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 ANKRD66B4E2M5 251 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 PRRT4C9JH25 899 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 TRAFD1O14545 582 aaPredicted RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 RFPL1O75677 317 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 KRT37O76014 449 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 TOP3BO95985 862 aaKnown RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 LAMP2P13473 410 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 ALADP13716 330 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 RPA3P35244 121 aaPredicted RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 PGGT1BP53609 377 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 SLC20A2Q08357 652 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 DPY19L3Q6ZPD9 716 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 SH2D5Q6ZV89 423 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 CHST14Q8NCH0 376 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 BRSK1Q8TDC3 778 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 HDAC10Q969S8 669 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 MYO19Q96H55 970 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 MSLNLQ96KJ4 702 aa17.07■□□□□ 0.32
CALD1-204ENST00000417172 CNOT10Q9H9A5 744 aaKnown RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 COLQQ9Y215 455 aaPredicted RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 ARIH1Q9Y4X5 557 aaPredicted RBP17.07■□□□□ 0.32
CALD1-204ENST00000417172 SCN8AQ9UQD0 1980 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 TYROBPO43914 113 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 KRT38O76015 456 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 PGLSO95336 258 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ITGA2BP08514 1039 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 GABRB3P28472 473 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 GP5P40197 560 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 SLC1A2P43004 574 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 CCNHP51946 323 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 BCL2L1Q07817 233 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 FCHO2Q0JRZ9 810 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 PTPRNQ16849 979 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 GLT6D1Q7Z4J2 308 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 PTAR1Q7Z6K3 402 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 MFSD6LQ8IWD5 586 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ATXN2LQ8WWM7 1075 aaKnown RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 TBATAQ96M53 351 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 RBBP8Q99708 897 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 CPNE1Q99829 537 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ZDHHC6Q9H6R6 413 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 OBP2AQ9NY56 170 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 TXNDC16Q9P2K2 825 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 MUC22E2RYF6 1773 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 SOX1O00570 391 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 ALDOAP04075 364 aaKnown RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 SEMG2Q02383 582 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 GABPB1Q06547 395 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 NAB1Q13506 487 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 DMC1Q14565 340 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ARMC12Q5T9G4 340 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ZNF470Q6ECI4 717 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ZNF449Q6P9G9 518 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 SPNS2Q8IVW8 549 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 ZNF557Q8N988 423 aaPredicted RBP17.06■□□□□ 0.32
CALD1-204ENST00000417172 GDAP1Q8TB36 358 aa17.06■□□□□ 0.32
CALD1-204ENST00000417172 PIH1D2Q8WWB5 315 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms