RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 ITM2BQ9Y287 266 aa23.25■■□□□ 1.31
SMARCB1-205ENST00000417137 DMDP11532 3685 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 NUMA1Q14980 2115 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 PATE3B3GLJ2 98 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC31A1O15431 190 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 AKT2P31751 481 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 CD86P42081 329 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 ID4P47928 161 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 EPHB1P54762 984 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 RPL26P61254 145 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 IRX4P78413 519 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 LMNB2Q03252 620 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 STAT4Q14765 748 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 SF3A2Q15428 464 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 AASDHQ4L235 1098 aaPredicted RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 SEL1L3Q68CR1 1132 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 ADAT2Q7Z6V5 191 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 ZSWIM9Q86XI8 627 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 ASB12Q8WXK4 309 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 IMP4Q96G21 291 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 C1QTNF7Q9BXJ2 289 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 C1QTNF2Q9BXJ5 285 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 CAPN10Q9HC96 672 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 PYCARDQ9ULZ3 195 aa23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 RPL26L1Q9UNX3 145 aaKnown RBP23.24■■□□□ 1.31
SMARCB1-205ENST00000417137 SHROOM3Q8TF72 1996 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 CFAP69A5D8W1 941 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 IGLON5A6NGN9 336 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 SPINT1O43278 529 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 TM7SF2O76062 418 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 CYP2A6P11509 494 aaPredicted RBP23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 ITIH2P19823 946 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 HNRNPA2B1P22626 353 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 GRIA4P48058 902 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 SKOR1P84550 965 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC14A2Q15849 920 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 ZNF567Q8N184 647 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC35F6Q8N357 371 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 KLK6Q92876 244 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 FAM118BQ9BPY3 351 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 TDRD1Q9BXT4 1180 aaKnown RBP23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 ADGRE3Q9BY15 652 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 ZDHHC5Q9C0B5 715 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 GGT7Q9UJ14 662 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 OTOGLQ3ZCN5 2332 aa23.23■■□□□ 1.31
SMARCB1-205ENST00000417137 ENC1O14682 589 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 KCNN4O15554 427 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 CEP104O60308 925 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 FZD6O60353 706 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 MMP20O60882 483 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 PAK4O96013 591 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 CD38P28907 300 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 MMP12P39900 470 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 CSNK1EP49674 416 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 ATXN3P54252 364 aaPredicted RBP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 ARHGAP8P85298 464 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 ITPRIPL1Q6GPH6 555 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 TCEAL6Q6IPX3 200 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 USP45Q70EL2 814 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 FAM174AQ8TBP5 190 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 PIH1D2Q8WWB5 315 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 TCEAL3Q969E4 200 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 SCRN2Q96FV2 425 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 PBKQ96KB5 322 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC6A18Q96N87 628 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 RBM15Q96T37 977 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 WRAP53Q9BUR4 548 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 PCDH9Q9HC56 1237 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 CHKBQ9Y259 395 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 PPIL1Q9Y3C6 166 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 VPS13AQ96RL7 3174 aa23.22■■□□□ 1.31
SMARCB1-205ENST00000417137 CEP192Q8TEP8 1941 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 TCRBV7S2A1N4TA0A589 114 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 ARHGAP33O14559 1287 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 MAGEC1O60732 1142 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 PRKCGP05129 697 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 MMP2P08253 660 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 PRLRP16471 622 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 TNNT3P45378 269 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 C21orf59P57076 290 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 OVGP1Q12889 678 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 CCDC70Q6NSX1 233 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 IL27RAQ6UWB1 636 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 DPPA4Q7L190 304 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 IQCHQ86VS3 1027 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 MFSD2AQ8NA29 543 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 SLC35B2Q8TB61 432 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 LENG8Q96PV6 779 aaPredicted RBP23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 FCRL5Q96RD9 977 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 C10orf88Q9H8K7 445 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 HS3ST3A1Q9Y663 406 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 GVINP1Q7Z2Y8 2422 aa23.21■■□□□ 1.31
SMARCB1-205ENST00000417137 USP27XA6NNY8 438 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 VILLO15195 856 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 LZTS3O60299 673 aaPredicted RBP23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 PDHA1P08559 390 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 VIPR1P32241 457 aa23.2■■□□□ 1.3
SMARCB1-205ENST00000417137 LIG3P49916 1009 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms