RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 FAM46DQ8NEK8 389 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 USP7Q93009 1102 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 SEMA3CQ99985 751 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 APOOQ9BUR5 198 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 SIX2Q9NPC8 291 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 DKK3Q9UBP4 350 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 SEPT3Q9UH03 358 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 TMEM59LQ9UK28 342 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 APPL1Q9UKG1 709 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 OR1A2Q9Y585 309 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 RNF215Q9Y6U7 377 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 LRRK1Q38SD2 2015 aa10.12□□□□□ -0.79
MDC1-202ENST00000416571 UNC13CQ8NB66 2214 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 RELNP78509 3460 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 A0A1W2PQC6 194 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 CACNB4O00305 520 aaPredicted RBP10.11□□□□□ -0.79
MDC1-202ENST00000416571 PES1O00541 588 aaKnown RBP10.11□□□□□ -0.79
MDC1-202ENST00000416571 ZW10O43264 779 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 LRIG2O94898 1065 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 PCCBP05166 539 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
MDC1-202ENST00000416571 TIMP2P16035 220 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 PNLIPP16233 465 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 ITGB6P18564 788 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 KELP23276 732 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 CD82P27701 267 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 ATP1A2P50993 1020 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 MTM1Q13496 603 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 GRM3Q14832 879 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 TBR1Q16650 682 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 C15orf59Q2T9L4 293 aaPredicted RBP10.11□□□□□ -0.79
MDC1-202ENST00000416571 WSCD2Q2TBF2 565 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 COLEC12Q5KU26 742 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 CERCAMQ5T4B2 595 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 ARTNQ5T4W7 220 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 MANEALQ5VSG8 457 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 NAA35Q5VZE5 725 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 SPRED1Q7Z699 444 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 FAM114A1Q8IWE2 563 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 GPR156Q8NFN8 814 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 CPA5Q8WXQ8 436 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 HMCESQ96FZ2 354 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 EXOC2Q96KP1 924 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 RBM15Q96T37 977 aaKnown RBP eCLIP10.11□□□□□ -0.792e-6■■■■□ 23.9
MDC1-202ENST00000416571 SLC25A18Q9H1K4 315 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 DPEP2Q9H4A9 486 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 LRIT1Q9P2V4 623 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 MOSPD1Q9UJG1 213 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 SRPK3Q9UPE1 567 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 MFHAS1Q9Y4C4 1052 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 DAAM1Q9Y4D1 1078 aa10.11□□□□□ -0.79
MDC1-202ENST00000416571 AHCTF1Q8WYP5 2266 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 B4DGG1 531 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 FAM72CH0Y354 149 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 PIGNO95427 931 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 MMEP08473 750 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 PLEKP08567 350 aaPredicted RBP10.1□□□□□ -0.79
MDC1-202ENST00000416571 ETV5P41161 510 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 LIG3P49916 1009 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 NOMO3P69849 1222 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 CYP4F2P78329 520 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 TLE1Q04724 770 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 ZFP36L1Q07352 338 aaKnown RBP10.1□□□□□ -0.79
MDC1-202ENST00000416571 BIRC2Q13490 618 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 UGP2Q16851 508 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 C14orf28Q4W4Y0 310 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 INO80DQ53TQ3 878 aaPredicted RBP10.1□□□□□ -0.79
MDC1-202ENST00000416571 FAM72AQ5TYM5 149 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 FAM72DQ6L9T8 149 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 STRADAQ7RTN6 431 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 PIM3Q86V86 326 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 FAM72BQ86X60 149 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 DNAAF5Q86Y56 855 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 NETO2Q8NC67 525 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 OR56A4Q8NGH8 313 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 KIAA1524Q8TCG1 905 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 HCAR2Q8TDS4 363 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 RXFP2Q8WXD0 754 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 PDXPQ96GD0 296 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 NDST4Q9H3R1 872 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 SUV39H2Q9H5I1 410 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 PCDH12Q9NPG4 1184 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 FOXJ2Q9P0K8 574 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 FHOD1Q9Y613 1164 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
MDC1-202ENST00000416571 RASA4BC9J798 803 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 STMND1H3BQB6 276 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 INSIG1O15503 277 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 RASA4O43374 803 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 NUDT21O43809 227 aaKnown RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 CPNE6O95741 557 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 EPHB2P29323 1055 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 PTPN9P43378 593 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 YBEYP58557 167 aaPredicted RBP10.09□□□□□ -0.79
MDC1-202ENST00000416571 KIAA1024LP59773 190 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 AGERQ15109 404 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 AMZ1Q400G9 498 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 VWA3BQ502W6 1294 aa10.09□□□□□ -0.79
MDC1-202ENST00000416571 RAB6CQ53S08 254 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms