RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CFAP53Q96M91 514 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 BBS4Q96RK4 519 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SIK2Q9H0K1 926 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SLC22A11Q9NSA0 550 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 HSFX1Q9UBD0 423 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 RABL2BQ9UNT1 228 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 SSX2IPQ9Y2D8 614 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 ENTPD2Q9Y5L3 495 aa2.66□□□□□ -1.98
MCF2-204ENST00000414978 CCDC196A0A1B0GTZ2 297 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 TARSL2A2RTX5 802 aaKnown RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 FAM90A8PA6NJQ4 464 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 EFCAB8A8MWE9 144 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 GRXCR1A8MXD5 290 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 BCAT2O15382 392 aaPredicted RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 PRICKLE3O43900 615 aaPredicted RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 SUN1O94901 812 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 GALTP07902 379 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 FAM90A13PP0C7W8 464 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 FAM90A24PP0C7X0 464 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PCP11498 1178 aaKnown RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 FOSL2P15408 326 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 ENGP17813 658 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PSMB10P40306 273 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 SLC15A1P46059 708 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 C21orf58P58505 322 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 RAC3P60763 192 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 E2F1Q01094 437 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 YWHAHQ04917 246 aaPredicted RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 TUBB3Q13509 450 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 ATP1A4Q13733 1029 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 E2F2Q14209 437 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 SEMA3AQ14563 771 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 CSRP2Q16527 193 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 CES5AQ6NT32 575 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PPP1R32Q7Z5V6 425 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PDSS2Q86YH6 399 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 IZUMO1Q8IYV9 350 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 POC5Q8NA72 575 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 NFKBIDQ8NI38 313 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 MZB1Q8WU39 189 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PGAP3Q96FM1 320 aaPredicted RBP2.65□□□□□ -1.98
MCF2-204ENST00000414978 ZDHHC12Q96GR4 267 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 AJUBAQ96IF1 538 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 VPS50Q96JG6 964 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 PIGSQ96S52 555 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 SMC6Q96SB8 1091 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.65□□□□□ -1.98
MCF2-204ENST00000414978 SAP30LQ9HAJ7 183 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 GPR35Q9HC97 309 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 TBCCD1Q9NVR7 557 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 P4HTMQ9NXG6 502 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 EHD2Q9NZN4 543 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 RAPGEFL1Q9UHV5 662 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 ADAM18Q9Y3Q7 739 aa2.65□□□□□ -1.98
MCF2-204ENST00000414978 CCDC195A0A1B0GUA6 201 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 C1orf226A1L170 272 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 NRP1O14786 923 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 RNF113AO15541 343 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 DYRK3O43781 588 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SMPD2O60906 423 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 FAM20BO75063 409 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 AMHP03971 560 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ALDOCP09972 364 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 ZNF37AP17032 561 aaPredicted RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 MCM7P33993 719 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 IL15P40933 162 aaPredicted RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 GNAQP50148 359 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SLC26A5P58743 744 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 HTD2P86397 168 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 B4GALNT1Q00973 533 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 BFSP1Q12934 665 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CBFBQ13951 182 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PCLAFQ15004 111 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TAZQ16635 292 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CCDC142Q17RM4 750 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 CBWD5Q5RIA9 395 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ERMARDQ5T6L9 678 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 STRIP1Q5VSL9 837 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 OLFML2BQ68BL8 750 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PPP1R21Q6ZMI0 780 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 RBPMS2Q6ZRY4 209 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 SLFN11Q7Z7L1 901 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KBTBD2Q8IY47 623 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ZNF419Q96HQ0 510 aaPredicted RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 FER1L6-AS2Q96M78 137 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SLC6A17Q9H1V8 727 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 RABEP2Q9H5N1 569 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 ERVK-5Q9HDB9 667 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 SNTG1Q9NSN8 517 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 HSPBP1Q9NZL4 362 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 RRP15Q9Y3B9 282 aaKnown RBP2.65□□□□□ -1.99
MCF2-204ENST00000414978 TEX264Q9Y6I9 313 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 NLRC5Q86WI3 1866 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 B5MCH6 92 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PSMD9O00233 223 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 PROM1O43490 865 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 EXOC3O60645 756 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 TPPPO94811 219 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KAT7O95251 611 aa2.65□□□□□ -1.99
MCF2-204ENST00000414978 KCNK5O95279 499 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms