RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 APODP05090 189 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ATP5BP06576 529 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 DLDP09622 509 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 CCNB1P14635 433 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 DRD1P21728 446 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 KIR2DL1P43626 348 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 STARD6P59095 220 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 MGAT5Q09328 741 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 WASHC5Q12768 1159 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 PON2Q15165 354 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 TIGD7Q6NT04 549 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 LINGO4Q6UY18 593 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 CDKL3Q8IVW4 592 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
DDB1-202ENST00000414411 CNTD1Q8N815 330 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 FAM3CQ92520 227 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 PMM1Q92871 262 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 PBXIP1Q96AQ6 731 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ALKBH8Q96BT7 664 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 RPL10LQ96L21 214 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 RMDN2Q96LZ7 410 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SP110Q9HB58 689 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ARHGEF3Q9NR81 526 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SLCO3A1Q9UIG8 710 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 GGT7Q9UJ14 662 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ERVW-1Q9UQF0 538 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 K7ERQ8 282 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 MAN2B1O00754 1011 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 MTSS1O43312 755 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SMAD6O43541 496 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 ASLP04424 464 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SRPRAP08240 638 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 HNRNPLP14866 589 aaKnown RBP eCLIP10.05□□□□□ -0.8
DDB1-202ENST00000414411 CD72P21854 359 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 PTPN3P26045 913 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 STK19P49842 368 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 SERPINH1P50454 418 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 RENBPP51606 427 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 NCALDP61601 193 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 BNIP1Q12981 228 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ZBTB17Q13105 803 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ENPP2Q13822 863 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 CCINQ13939 588 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 RFTN1Q14699 578 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 CYTH1Q15438 398 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 TEX44Q53QW1 395 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 FAM182AQ5T1J6 154 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SYCP2LQ5T4T6 812 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 HHATQ5VTY9 493 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 HEATR6Q6AI08 1181 aaKnown RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 LVRNQ6Q4G3 990 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 RINLQ6ZS11 566 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 TPRG1Q6ZUI0 275 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 ZNF354CQ86Y25 554 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 CCDC63Q8NA47 563 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 KDM1BQ8NB78 822 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 LRRC8CQ8TDW0 803 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 CYB5D2Q8WUJ1 264 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 SLC44A1Q8WWI5 657 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 CIPCQ9C0C6 399 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 UBA2Q9UBT2 640 aaPredicted RBP10.05□□□□□ -0.8
DDB1-202ENST00000414411 PHTF1Q9UMS5 762 aa10.05□□□□□ -0.8
DDB1-202ENST00000414411 TECTAO75443 2155 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 CFAP73A6NFT4 308 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 TM9SF1O15321 606 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 ATP9BO43861 1147 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 SH3BP5O60239 455 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 AVILO75366 819 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 ZNF189O75820 626 aaPredicted RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 EGFP01133 1207 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 JCHAINP01591 159 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 SRCP12931 536 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 CCDC15Q0P6D6 951 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 GRSF1Q12849 480 aaKnown RBP eCLIP10.04□□□□□ -0.8
DDB1-202ENST00000414411 FZD5Q13467 585 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 LBRQ14739 615 aaKnown RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 KBTBD12Q3ZCT8 623 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 FAXCQ5TGI0 409 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 MARC1Q5VT66 337 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 C4orf22Q6V702 233 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 ZNF852Q6ZMS4 543 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 BANPQ8N9N5 519 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 ISG20Q96AZ6 181 aaKnown RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 TEKT5Q96M29 485 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 PSKH2Q96QS6 385 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 VAT1Q99536 393 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 TMEM245Q9H330 911 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 SLCO1B3Q9NPD5 702 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 CA14Q9ULX7 337 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 PLA2G4CQ9UP65 541 aa10.04□□□□□ -0.8
DDB1-202ENST00000414411 MUC22E2RYF6 1773 aaPredicted RBP10.04□□□□□ -0.8
DDB1-202ENST00000414411 IQANK1A0A1B0GTG1 560 aa10.03□□□□□ -0.8
DDB1-202ENST00000414411 RNF103O00237 685 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms