RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ANKRD36A6QL64 1941 aa6.7□□□□□ -1.34
VPS41-204ENST00000413141 MYO9BQ13459 2157 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CCDC78A2IDD5 438 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 TTC34A8MYJ7 566 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 WASH3PC4AMC7 463 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 LDB2O43679 373 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BNIP3LO60238 219 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PGLSO95336 258 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PAPSS2O95340 614 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 PIRTP0C851 137 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BMP1P13497 986 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ARNTP27540 789 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ATP5DP30049 168 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 GKP32189 559 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 MSH2P43246 934 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ARCN1P48444 511 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 ZNF140P52738 457 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 RPL26P61254 145 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 ST8SIA6P61647 398 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BCL2L1Q07817 233 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 MGAT5Q09328 741 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 SKIV2LQ15477 1246 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 SMAD1Q15797 465 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 QPCTQ16769 361 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 AAK1Q2M2I8 961 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 MYLK3Q32MK0 819 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ACCSLQ4AC99 568 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CARD16Q5EG05 197 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 TSTD2Q5T7W7 516 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ARMC12Q5T9G4 340 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PDPK2PQ6A1A2 396 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 KIAA0930Q6ICG6 404 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 GPR153Q6NV75 609 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ADGRD1Q6QNK2 874 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 DPY19L3Q6ZPD9 716 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 NLRP9Q7RTR0 991 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 GLT6D1Q7Z4J2 308 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 KCNMB4Q86W47 210 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 SLC26A11Q86WA9 606 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 LRRC6Q86X45 466 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CAMK1DQ8IU85 385 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 SFTPA1Q8IWL2 248 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CTAGE3PQ8IX95 158 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PLPP6Q8IY26 295 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CYP4X1Q8N118 509 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 RYBPQ8N488 228 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 PPM1NQ8N819 430 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 KDM1BQ8NB78 822 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 OR13J1Q8NGT2 312 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 OR2A12Q8NGT7 310 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BRSK1Q8TDC3 778 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BLOC1S5Q8TDH9 187 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CDKL2Q92772 493 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PEX13Q92968 403 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 RMDN1Q96DB5 314 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 GUCD1Q96NT3 240 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 CPEB1Q9BZB8 566 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 STMN4Q9H169 189 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 ZDHHC6Q9H6R6 413 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BRD9Q9H8M2 597 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PPANQ9NQ55 473 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 ELOVL2Q9NXB9 296 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS41-204ENST00000413141 ZFATQ9P243 1243 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BCCIPQ9P287 314 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS41-204ENST00000413141 SLC17A6Q9P2U8 582 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 HECAQ9UBI9 543 aaPredicted RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 SLC2A6Q9UGQ3 507 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 TBK1Q9UHD2 729 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 ZNF180Q9UJW8 692 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 RPL26L1Q9UNX3 145 aaKnown RBP6.69□□□□□ -1.34
VPS41-204ENST00000413141 SLC8A2Q9UPR5 921 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 PCDHB9Q9Y5E1 797 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 C5orf42Q9H799 3197 aa6.69□□□□□ -1.34
VPS41-204ENST00000413141 BRWD1Q9NSI6 2320 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 ZNF106Q9H2Y7 1883 aaKnown RBP6.68□□□□□ -1.34
VPS41-204ENST00000413141 SCN8AQ9UQD0 1980 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 TBC1D3BA6NDS4 549 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 CAPN8A6NHC0 703 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 ANKRD66B4E2M5 251 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 TIMM44O43615 452 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 UGT1A9O60656 530 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 FAM155BO75949 473 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 KAT7O95251 611 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 POP4O95707 220 aaKnown RBP6.68□□□□□ -1.34
VPS41-204ENST00000413141 CRTAMO95727 393 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 UGT2B4P06133 528 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 CTSLP07711 333 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 INHBAP08476 426 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 ERVK-10P10266 1014 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 PAMP19021 973 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 NR1D1P20393 614 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 SLC8A1P32418 973 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 NNMTP40261 264 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 GRIA2P42262 883 aa6.68□□□□□ -1.34
VPS41-204ENST00000413141 RECQLP46063 649 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms