RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 DGCR6Q14129 220 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CAPRIN1Q14444 709 aaKnown RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CA9Q16790 459 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 DUSP28Q4G0W2 176 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 OTUD3Q5T2D3 398 aaPredicted RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 PRMT9Q6P2P2 845 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TMEM26Q6ZUK4 368 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 BBS7Q8IWZ6 715 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TMEM86AQ8N2M4 240 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CARNMT1Q8N4J0 409 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 AKAP1Q92667 903 aaKnown RBP eCLIP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TMCO6Q96DC7 493 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TOR3AQ9H497 397 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SLA2Q9H6Q3 261 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SACM1LQ9NTJ5 587 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 VPS28Q9UK41 221 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TMCC3Q9ULS5 477 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 ABCG2Q9UNQ0 655 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 RPTORQ8N122 1335 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 PLD2O14939 933 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 LYPLA2O95372 231 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 NTRK1P04629 796 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 HSMCR30P0CW71 290 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CHRM3P20309 590 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 YWHAQP27348 245 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 GRK3P35626 688 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SLC1A5Q15758 541 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 TIMM50Q3ZCQ8 353 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 ERAP2Q6P179 960 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 LRRC55Q6ZSA7 311 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 ARCQ7LC44 396 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SLC9A9Q8IVB4 645 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SLC22A8Q8TCC7 542 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 MAGEE2Q8TD90 523 aaPredicted RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 KAT5Q92993 513 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 CDK5RAP1Q96SZ6 601 aaKnown RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 NAT9Q9BTE0 207 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SERHL2Q9H4I8 314 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 SLC39A10Q9ULF5 831 aa8.56□□□□□ -1.04
PBRM1-209ENST00000412587 MRPS7Q9Y2R9 242 aaKnown RBP8.56□□□□□ -1.04
PBRM1-209ENST00000412587 AURKAO14965 403 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 NCAM2O15394 837 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 APOA4P06727 396 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ADRB2P07550 413 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 KLRC2P26717 231 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 PURAQ00577 322 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 CSTF3Q12996 717 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 UGCGQ16739 394 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 HSDL1Q3SXM5 330 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ARSHQ5FYA8 562 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 AGAP9Q5VTM2 703 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 FKBP9P1Q75LS8 142 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SCUBE3Q8IX30 993 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 RP9Q8TA86 221 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 PCDHGB4Q9UN71 923 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 VPS9D1Q9Y2B5 631 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ASTN1O14525 1302 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 C2orf81A6NN90 581 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 LOC110117498-PIK3R3F6TDL0 507 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 NFKBIEO00221 500 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 WNT7AO00755 349 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TBX1O43435 398 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 CREB1P16220 341 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 VARSP26640 1264 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TBX4P57082 545 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 LGALS3BPQ08380 585 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SPIRE1Q08AE8 756 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 WDR36Q8NI36 951 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 CHPT1Q8WUD6 406 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TNFRSF25Q93038 417 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ACO2Q99798 780 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TMEM121Q9BTD3 319 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 C1orf21Q9H246 121 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ANKMY1Q9P2S6 941 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 B3GNT3Q9Y2A9 372 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TEX51A0A1B0GUA7 166 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ZNF701M0R085 212 aaPredicted RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ENDOD1O94919 500 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 NFICP08651 508 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 ZBTB48P10074 688 aaPredicted RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 CYP2F1P24903 491 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 PRIM2P49643 509 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 MYBPC1Q00872 1141 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 TNFAIP8L3Q5GJ75 292 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 SULT1C3Q6IMI6 304 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 MRNIPQ6NTE8 343 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 IKBIPQ70UQ0 350 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 UNC93AQ86WB7 457 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 DEFB106AQ8N104 65 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 BAP1Q92560 729 aa8.55□□□□□ -1.04
PBRM1-209ENST00000412587 YTHDF1Q9BYJ9 559 aaKnown RBP8.55□□□□□ -1.04
PBRM1-209ENST00000412587 LRRC19Q9H756 370 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms