RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF627Q7L945 461 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 OTOAQ7RTW8 1153 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 BCDIN3DQ7Z5W3 292 aaKnown RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 RASAL3Q86YV0 1011 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TERB1Q8NA31 727 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 CTCFLQ8NI51 663 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NEK9Q8TD19 979 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NEU4Q8WWR8 484 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 MR1Q95460 341 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 GTF3C6Q969F1 213 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 DAZAP1Q96EP5 407 aaKnown RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 PPP1R13BQ96KQ4 1090 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 GAD1Q99259 594 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NPAS1Q99742 590 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ELOVL1Q9BW60 279 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 NPLQ9BXD5 320 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ADGRE3Q9BY15 652 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 TRIM31Q9BZY9 425 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 IKZF4Q9H2S9 585 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 C20orf141Q9NUB4 165 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 ARHGEF38Q9NXL2 777 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 GAR1Q9NY12 217 aaKnown RBP4.67□□□□□ -1.66
BRCA1-204ENST00000412061 AMACRQ9UHK6 382 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 COG5Q9UP83 839 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 BTBD3Q9Y2F9 522 aa4.67□□□□□ -1.66
BRCA1-204ENST00000412061 SPATA31A1Q5TZJ5 1347 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CYP3A7-CYP3A51PA0A087WV96 503 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 LRRC53A6NM62 1247 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 PLOD2O00469 737 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 NDC80O14777 642 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 TXNL1O43396 289 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CEP104O60308 925 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 SEC22BO75396 215 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 RECQL5O94762 991 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 IPO7O95373 1038 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 MT-CO3P00414 261 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 FYNP06241 537 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 HMOX1P09601 288 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 ERCC2P18074 760 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CYP3A7P24462 503 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 PLA2G5P39877 138 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 LIMK1P53667 647 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 SLC12A3P55017 1021 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CSE1LP55060 971 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 WDR5P61964 334 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 SCN1BQ07699 218 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 IKQ13123 557 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 RPA4Q13156 261 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 PTK6Q13882 451 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 RCN2Q14257 317 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 LASP1Q14847 261 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 TNIP1Q15025 636 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CNGA3Q16281 694 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 GPR162Q16538 588 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 SLC18A3Q16572 532 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 GLRA4Q5JXX5 417 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 TSTD2Q5T7W7 516 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 FAM171A1Q5VUB5 890 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 JADE1Q6IE81 842 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 TMEM88Q6PEY1 159 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 VPS52Q8N1B4 723 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 MINDY1Q8N5J2 469 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 DPP10Q8N608 796 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 SRFBP1Q8NEF9 429 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 AKAP1Q92667 903 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 PTERQ96BW5 349 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 MMABQ96EY8 250 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 KAZALD1Q96I82 304 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 BBC3Q96PG8 261 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 HDHD5Q9BXW7 423 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 MRPL1Q9BYD6 325 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 CHCHD3Q9NX63 227 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 WSB2Q9NYS7 404 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 HDAC6Q9UBN7 1215 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 OSGIN1Q9UJX0 560 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 PACSIN3Q9UKS6 424 aa4.66□□□□□ -1.66
BRCA1-204ENST00000412061 RRP15Q9Y3B9 282 aaKnown RBP4.66□□□□□ -1.66
BRCA1-204ENST00000412061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 LRRD1A4D1F6 860 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 A6NL46 340 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 OR6C76A6NM76 312 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 H7C1Q1 480 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ASAP2O43150 1006 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 KAT7O95251 611 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 PNPP00491 289 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 PRPH2P23942 346 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 MC5RP33032 325 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 GNAQP50148 359 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 SOX10P56693 466 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 IL11RAQ14626 422 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 IL13RA2Q14627 380 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 TYSND1Q2T9J0 566 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 C15orf59Q2T9L4 293 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ASTE1Q2TB18 679 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ZRANB3Q5FWF4 1079 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 ATG9BQ674R7 924 aa4.65□□□□□ -1.67
BRCA1-204ENST00000412061 GJB7Q6PEY0 223 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms