RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 GALNT1Q10472 559 aaPredicted RBP15.98■□□□□ 0.15
HOXD3-202ENST00000410016 ADGRE1Q14246 886 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 C11orf91Q3C1V1 193 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 HECTD2Q5U5R9 776 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 TFAP2DQ7Z6R9 452 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
HOXD3-202ENST00000410016 MON1AQ86VX9 555 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 CCDC126Q96EE4 140 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 KLHL32Q96NJ5 620 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 KLHL5Q96PQ7 755 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 SCML2Q9UQR0 700 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 VWA7Q9Y334 891 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 PCDHGA7Q9Y5G6 932 aa15.98■□□□□ 0.15
HOXD3-202ENST00000410016 DNAJA2O60884 412 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CNTN5O94779 1100 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 RBP1P09455 135 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CYBAP13498 195 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 ARSDP51689 593 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PLK1P53350 603 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 ACAP2Q15057 778 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SLC39A12Q504Y0 691 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 ALFQ53S48 1182 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 MARC1Q5VT66 337 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SDHAF4Q5VUM1 108 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 MSANTD2Q6P1R3 559 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CYHR1Q6ZMK1 362 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 GK5Q6ZS86 529 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SCN4BQ8IWT1 228 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 ST13P4Q8IZP2 240 aaPredicted RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 MARVELD2Q8N4S9 558 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SH3RF2Q8TEC5 729 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 ZFAND2BQ8WV99 257 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TADA1Q96BN2 335 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 BCAP29Q9UHQ4 241 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 UBFD1O14562 309 aaKnown RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SLC7A4O43246 635 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 S1PR4O95977 384 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 RHOQP17081 205 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CHN2P52757 468 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 CDKN2DP55273 166 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 DSC2Q02487 901 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PSMD5Q16401 504 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PPP1R3AQ16821 1122 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 MS4A13Q5J8X5 152 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PTAR1Q7Z6K3 402 aaPredicted RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TEX26Q8N6G2 289 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 FAM156AQ8NDB6 213 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 DLG3Q92796 817 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PHF21BQ96EK2 531 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TMA16Q96EY4 203 aaKnown RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 FAR2Q96K12 515 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 SPATA16Q9BXB7 569 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 COPS7BQ9H9Q2 264 aaPredicted RBP15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TMEM248Q9NWD8 314 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 PCDHB8Q9UN66 801 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 FIS1Q9Y3D6 152 aa15.97■□□□□ 0.15
HOXD3-202ENST00000410016 TTC24A2A3L6 582 aaPredicted RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 INHBCP55103 352 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 ROR2Q01974 943 aaKnown RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 LRP8Q14114 963 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 PTK2BQ14289 1009 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 FAM43BQ6ZT52 329 aaPredicted RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 ISCA2Q86U28 154 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 LDB1Q86U70 411 aaPredicted RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 ARRDC2Q8TBH0 407 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 PSMG2Q969U7 264 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 LRGUKQ96M69 825 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 PKP2Q99959 881 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 MRPL1Q9BYD6 325 aaKnown RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 ZYG11BQ9C0D3 744 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 GSTO2Q9H4Y5 243 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 EML4Q9HC35 981 aaKnown RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 ABI2Q9NYB9 513 aaPredicted RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 UBAP1Q9NZ09 502 aa15.96■□□□□ 0.15
HOXD3-202ENST00000410016 MTF2Q9Y483 593 aaPredicted RBP15.96■□□□□ 0.15
HOXD3-202ENST00000410016 IGLV3-10A0A075B6K4 115 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 CCL22O00626 93 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 FBP2O00757 339 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 INPPL1O15357 1258 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 RPLP2P05387 115 aaKnown RBP15.95■□□□□ 0.14
HOXD3-202ENST00000410016 PABPC4LP0CB38 370 aaKnown RBP15.95■□□□□ 0.14
HOXD3-202ENST00000410016 GPR15P49685 360 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 POLE2P56282 527 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 USP46P62068 366 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 TNK2Q07912 1038 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 ITKQ08881 620 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 DDR2Q16832 855 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 RARS2Q5T160 578 aaKnown RBP15.95■□□□□ 0.14
HOXD3-202ENST00000410016 FAM219BQ5XKK7 198 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 KLC3Q6P597 504 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 NUP93Q8N1F7 819 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 PGBD5Q8N414 524 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 ADCY4Q8NFM4 1077 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 HDAC10Q969S8 669 aa15.95■□□□□ 0.14
HOXD3-202ENST00000410016 TSPAN17Q96FV3 270 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms