RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PARPBPQ9NWS1 579 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CA14Q9ULX7 337 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 BIRC5O15392 142 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 B4GALT5O43286 388 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 KERAO60938 352 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CSH1P0DML2 217 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CSH2P0DML3 217 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MAGEA9P43362 315 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SLC8B1Q6J4K2 584 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LRRC34Q8IZ02 419 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF366Q8N895 744 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 TMEM237Q96Q45 408 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 DCUN1D5Q9BTE7 237 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 DNPEPQ9ULA0 475 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 H3BNH8 94 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ASGR1P07306 291 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 TGFB3P10600 412 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SSR2P43308 183 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 INHBEP58166 350 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF410Q86VK4 478 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 BRSK1Q8TDC3 778 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 COPS7AQ9UBW8 275 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 A0A0G2JN53 185 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 H3BM21 787 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 PEX14O75381 377 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SLC6A3Q01959 620 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 GPM6BQ13491 265 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 UBE2R2Q712K3 238 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 BEND5Q7L4P6 421 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LDB1Q86U70 411 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 GALNT13Q8IUC8 556 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ABHD5Q8WTS1 349 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 FTHL17Q9BXU8 183 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 RACGAP1Q9H0H5 632 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SH3BGRL2Q9UJC5 107 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 U3KQV3 271 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MYH7P12883 1935 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 FAM205AQ6ZU69 1335 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NPEPPSL1A6NEC2 478 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 QSOX1O00391 747 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CPNE6O95741 557 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 C1RP00736 705 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 GOT1P17174 413 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 HTRA3P83110 453 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 USP4Q13107 963 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 PRSS55Q6UWB4 352 aaPredicted RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ENPP7Q6UWV6 458 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CHST4Q8NCG5 386 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 ANKS1AQ92625 1134 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LRRC39Q96DD0 335 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 MRPL45Q9BRJ2 306 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 KPNA5O15131 536 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 DCXO43602 365 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LYNP07948 512 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 UBA1P22314 1058 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 RPL22P35268 128 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 EIF1AXP47813 144 aaKnown RBP8.45□□□□□ -1.06
SCN9A-203ENST00000409672 CTBP1Q13363 440 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NLGN4XQ8N0W4 816 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LIX1Q8N485 282 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 LENG9Q96B70 501 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 SNX10Q9Y5X0 201 aa8.45□□□□□ -1.06
SCN9A-203ENST00000409672 NEXMIFQ5QGS0 1516 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 AFDNP55196 1824 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 F8VZ95 297 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PDE2AO00408 941 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ECDO95905 644 aaPredicted RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 LRPAP1P30533 357 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 SNRPFP62306 86 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CREMQ03060 361 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 SPANXN3Q5MJ09 141 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CXorf57Q6NSI4 855 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 JAZF1Q86VZ6 243 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 AGGF1Q8N302 714 aaeCLIP8.44□□□□□ -1.061e-10■□□□□ 9.6
SCN9A-203ENST00000409672 DNAJC9Q8WXX5 260 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ART5Q96L15 291 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 REEP1Q9H902 201 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 FAM105AQ9NUU6 356 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PRKCZQ05513 592 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PITRM1Q5JRX3 1037 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TRIM40Q6P9F5 258 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 BPIFB6Q8NFQ5 453 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 PJA1Q8NG27 643 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ENKURQ8TC29 256 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 EXOSC8Q96B26 276 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 FCRL4Q96PJ5 515 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TBCBQ99426 244 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 TTPALQ9BTX7 342 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CDC42EP4Q9H3Q1 356 aaKnown RBP8.44□□□□□ -1.06
SCN9A-203ENST00000409672 DSN1Q9H410 356 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 DIABLOQ9NR28 239 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 SDK1Q7Z5N4 2213 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 CDC42BPAQ5VT25 1732 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 STX16-NPEPL1H3BU86 382 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 XKRYO14609 159 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 STX16O14662 325 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF132P52740 706 aa8.44□□□□□ -1.06
SCN9A-203ENST00000409672 DMPKQ09013 629 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms