RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 NPY6RQ99463 290 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 SPATA16Q9BXB7 569 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 VCX3AQ9NNX9 186 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 RGPD3A6NKT7 1758 aaPredicted RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 RGPD4Q7Z3J3 1758 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 NR5A2O00482 541 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 MPOP05164 745 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 GLDCP23378 1020 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 MTFMTQ96DP5 389 aaKnown RBP13.48□□□□□ -0.25
COL6A2-204ENST00000409416 MARCH2Q9P0N8 246 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 FBXO5Q9UKT4 447 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PCDHGB4Q9UN71 923 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 PCDHGB5Q9Y5G0 923 aa13.48□□□□□ -0.25
COL6A2-204ENST00000409416 ZCWPW2A0A1B0GU75 182 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 FAM149AA5PLN7 773 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 AGRPO00253 132 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 PPP6CO00743 305 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 RTN3O95197 1032 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 SLC1A2P43004 574 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 CHN2P52757 468 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 INSCQ1MX18 579 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 CRYBG2Q8N1P7 616 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 MPP4Q96JB8 637 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 Q9H521 79 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 STN1Q9H668 368 aaKnown RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 NCKIPSDQ9NZQ3 722 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 ATG2BQ96BY7 2078 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 ARID1BQ8NFD5 2236 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 RGSL1A5PLK6 1076 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 IQCF5A8MTL0 148 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 KCNU1A8MYU2 1149 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 DDHD2O94830 711 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 STAMBPO95630 424 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 CLPTM1O96005 669 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 YWHAQP27348 245 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 PPP1R8Q12972 351 aaKnown RBP13.47□□□□□ -0.25
COL6A2-204ENST00000409416 PTK2BQ14289 1009 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 CARNMT1Q8N4J0 409 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 DBF4BQ8NFT6 615 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 TUBGCP3Q96CW5 907 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 RTKNQ9BST9 563 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 FBXW11Q9UKB1 542 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
COL6A2-204ENST00000409416 A0A0D9SEW6 157 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 CAPRIN1Q14444 709 aaKnown RBP13.46□□□□□ -0.25
COL6A2-204ENST00000409416 TLR1Q15399 786 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 LIPMQ5VYY2 423 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
COL6A2-204ENST00000409416 SHCBP1Q8NEM2 672 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 KCNA7Q96RP8 456 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 FAM192AQ9GZU8 254 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 STARD7Q9NQZ5 370 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 IGSF9Q9P2J2 1179 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 RAP2CQ9Y3L5 183 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 ZNF195O14628 629 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 TOMM70O94826 608 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 RHOBTB1O94844 696 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.25
COL6A2-204ENST00000409416 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
COL6A2-204ENST00000409416 TRPC4APQ8TEL6 797 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 TLR9Q9NR96 1032 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 OXSMQ9NWU1 459 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 AP4B1Q9Y6B7 739 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 ANK1P16157 1881 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
COL6A2-204ENST00000409416 SAC3D1A6NKF1 404 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 ZBBXA8MT70 800 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 E5RI56 91 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 B4GALT3O60512 393 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.26
COL6A2-204ENST00000409416 MYL4P12829 197 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 PPARGP37231 505 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-204ENST00000409416 HADHAP40939 763 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 GRIA2P42262 883 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 MTTPP55157 894 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 MS4A2Q01362 244 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 NRG1Q02297 640 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-204ENST00000409416 PLD1Q13393 1074 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 MAP7Q14244 749 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 RBBP7Q16576 425 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 NAT16Q8N8M0 369 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 TRPV1Q8NER1 839 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 HEXDCQ8WVB3 486 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 PHF12Q96QT6 1004 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.26
COL6A2-204ENST00000409416 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.26
COL6A2-204ENST00000409416 ZMYM5Q9UJ78 669 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 MID2Q9UJV3 735 aa13.46□□□□□ -0.26
COL6A2-204ENST00000409416 E9PAM4 449 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 DCLK1O15075 740 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 NAB1Q13506 487 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 DPYSQ14117 519 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 C6orf10Q5SRN2 563 aa13.45□□□□□ -0.26
COL6A2-204ENST00000409416 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms