RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ATXN7L3BQ96GX2 97 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RMDN2Q96LZ7 410 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 NUDCD1Q96RS6 583 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 TRIB3Q96RU7 358 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SIKE1Q9BRV8 207 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 FEM1AQ9BSK4 669 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 MECRQ9BV79 373 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 ADGRE3Q9BY15 652 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 LRRC3Q9BY71 257 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RASSF4Q9H2L5 321 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM96AQ9H5X1 160 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 NMRAL1Q9HBL8 299 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 NOD2Q9HC29 1040 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SAR1AQ9NR31 198 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 KCNK4Q9NYG8 393 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC2A6Q9UGQ3 507 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 DCTN4Q9UJW0 460 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 EMCNQ9ULC0 261 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 RUVBL2Q9Y230 463 aaKnown RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SH3BP1Q9Y3L3 701 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC4A7Q9Y6M7 1214 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 FNDC1Q4ZHG4 1894 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 SCN5AQ14524 2016 aa6.31□□□□□ -1.4
GTF3C3-202ENST00000409364 A0A087X1B8 175 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 A0A0G2JND7 137 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CXorf51AA0A1B0GTR3 108 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM95CA0A1B0GW59 222 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TTC24A2A3L6 582 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 C2orf81A6NN90 581 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TLL1O43897 1013 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HNRNPCL1O60812 293 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DNAJC6O75061 913 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZMPSTE24O75844 475 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HAUS5O94927 633 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 LUC7L3O95232 432 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GLP2RO95838 553 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GLUD1P00367 558 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CKMP06732 381 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 RALBP11234 206 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DDX6P26196 483 aaKnown RBP eCLIP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC26A3P40879 764 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC1A6P48664 564 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SGSHP51688 502 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CLCN5P51795 746 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KPNA2P52292 529 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 IRX4P78413 519 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 UBE3AQ05086 875 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ASPHQ12797 758 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OVGP1Q12889 678 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CDH18Q13634 790 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SMAD1Q15797 465 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PPM1LQ5SGD2 360 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MBLAC2Q68D91 279 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF470Q6ECI4 717 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MRNIPQ6NTE8 343 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PTAR1Q7Z6K3 402 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CILP2Q8IUL8 1156 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 C10orf107Q8IVU9 208 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 WDR75Q8IWA0 830 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DENND6AQ8IWF6 608 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OR13J1Q8NGT2 312 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GPR150Q8NGU9 434 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ADAMTS19Q8TE59 1207 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 DDI1Q8WTU0 396 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 HERVK_113Q902F9 699 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 BADQ92934 168 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ACDQ96AP0 544 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 RMDN1Q96DB5 314 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 THOC1Q96FV9 657 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC22A12Q96S37 553 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TCF25Q9BQ70 676 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 C2orf49Q9BVC5 232 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 MTIF3Q9H2K0 278 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TASP1Q9H6P5 420 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ECT2Q9H8V3 914 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CAB39LQ9H9S4 337 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KCNK13Q9HB14 408 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 ASAH2Q9NR71 780 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TXLNGQ9NUQ3 528 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 GGT7Q9UJ14 662 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 VPS28Q9UK41 221 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CORO1CQ9ULV4 474 aaPredicted RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CHKBQ9Y259 395 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 VWA7Q9Y334 891 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 OR51B4Q9Y5P0 310 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 E2F8A0AVK6 867 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 C2orf71A6NGG8 1288 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM114B3SHH9 223 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 PFDN6O15212 129 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC22O60826 627 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TRIM13O60858 407 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 RPP40O75818 363 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 TMCC1O94876 653 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 SNUPNO95149 360 aaKnown RBP6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 UNC5CO95185 931 aa6.3□□□□□ -1.4
GTF3C3-202ENST00000409364 KLHL2O95198 593 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms