RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 OR13H1Q8NG92 308 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 FAM174AQ8TBP5 190 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 BMFQ96LC9 184 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 CAMK1GQ96NX5 476 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 SEMA3CQ99985 751 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 POLR1EQ9GZS1 481 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 AMACRQ9UHK6 382 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 SHROOM3Q8TF72 1996 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 A6NNZ2 444 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 SOCS5O75159 536 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 MARCKSL1P49006 195 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 SEMG2Q02383 582 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 PPIDQ08752 370 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 AP1B1Q10567 949 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 TAZQ16635 292 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 N4BP2L1Q5TBK1 243 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 Q6ZSR6 202 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 ABI3BPQ7Z7G0 1075 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 EXD1Q8NHP7 514 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 KRT35Q92764 455 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 RBM41Q96IZ5 413 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 KLF6Q99612 283 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 C1QTNF7Q9BXJ2 289 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 ERVMER34-1Q9H9K5 563 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 TTLL3Q9Y4R7 772 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 PCDHB9Q9Y5E1 797 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 A0A1W2PQ67 120 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 MACROD2A1Z1Q3 448 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 POM121BA6NF01 834 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 HTRA2O43464 458 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 PCDHGA12O60330 932 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 CST8O60676 142 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 JCHAINP01591 159 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 CES1P23141 567 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 MMP12P39900 470 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 LIG3P49916 1009 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 TFDP3Q5H9I0 405 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 DBX2Q6ZNG2 339 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 BZW1Q7L1Q6 419 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 PTAR1Q7Z6K3 402 aaPredicted RBP18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 OXR1Q8N573 874 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 DENND6BQ8NEG7 585 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 RHBDD1Q8TEB9 315 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 CENPTQ96BT3 561 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 COQ6Q9Y2Z9 468 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 PCDHA3Q9Y5H8 950 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 NCOR2Q9Y618 2525 aa18.06■□□□□ 0.48
PDLIM2-206ENST00000409141 KCNK1O00180 336 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 FLRT2O43155 660 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 CPP00450 1065 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 C6P13671 934 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 CTNNA1P35221 906 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 DSC2Q02487 901 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 TRAF2Q12933 501 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 SHBQ15464 509 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 ARMC12Q5T9G4 340 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 DCP2Q8IU60 420 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 BRD8Q9H0E9 1235 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 SAE1Q9UBE0 346 aaPredicted RBP18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 TRIM10Q9UDY6 481 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 PHTF1Q9UMS5 762 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 RAI2Q9Y5P3 530 aa18.05■□□□□ 0.48
PDLIM2-206ENST00000409141 PCNX2A6NKB5 2137 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 hCG_1818297A0A087WSY0 165 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 A0A0U1RQJ8 604 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 SPAARA0A1B0GVQ0 90 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 GRID2IPA4D2P6 1211 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 A8MX80 341 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 YKT6O15498 198 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 LZTS3O60299 673 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 HLA-DQB2P05538 268 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 TGM2P21980 687 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 NFKBIAP25963 317 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 RABIFP47224 123 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 RXRGP48443 463 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 NR2C2P49116 596 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 IFI35P80217 286 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 SIM1P81133 766 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 TRIP6Q15654 476 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 KYAT3Q6YP21 454 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 B4GALNT4Q76KP1 1039 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 GATAD2AQ86YP4 633 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 LRRC57Q8N9N7 239 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 SPOCK2Q92563 424 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 OLFM3Q96PB7 478 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 IL12RB2Q99665 862 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 HEMGNQ9BXL5 484 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 SEPT10Q9P0V9 454 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 PCOLCE2Q9UKZ9 415 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 BTBD3Q9Y2F9 522 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 TMEM131Q92545 1883 aa18.04■□□□□ 0.48
PDLIM2-206ENST00000409141 CCDC66A2RUB6 948 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 CFAP69A5D8W1 941 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 PGLSO95336 258 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 ITGAVP06756 1048 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 ADRB1P08588 477 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 CTNNA2P26232 953 aa18.03■□□□□ 0.48
PDLIM2-206ENST00000409141 GRK6P43250 576 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms