RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PACSIN3Q9UKS6 424 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 TRAF6Q9Y4K3 522 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 LYVE1Q9Y5Y7 322 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 SOX10P56693 466 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 COPZ1P61923 177 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 GALNT15Q8N3T1 639 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 ULBP1Q9BZM6 244 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 PFDN2Q9UHV9 154 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 ST3GAL5Q9UNP4 418 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 DDX3YO15523 660 aaKnown RBP13.03□□□□□ -0.32
RNF43-201ENST00000407977 RGS10O43665 173 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 CCNB1P14635 433 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 BMP7P18075 431 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 TPSB2P20231 275 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 GMPSP49915 693 aaPredicted RBP13.03□□□□□ -0.32
RNF43-201ENST00000407977 PLCL1Q15111 1095 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 TPSAB1Q15661 275 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 FAM83AQ86UY5 434 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 TMEM139Q8IV31 216 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 C18orf25Q96B23 403 aaPredicted RBP13.03□□□□□ -0.32
RNF43-201ENST00000407977 OSGEPL1Q9H4B0 414 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 DENND2DQ9H6A0 471 aaPredicted RBP13.03□□□□□ -0.32
RNF43-201ENST00000407977 NOL11Q9H8H0 719 aaKnown RBP13.03□□□□□ -0.32
RNF43-201ENST00000407977 SLC17A7Q9P2U7 560 aa13.03□□□□□ -0.32
RNF43-201ENST00000407977 FAM240BA0A1B0GVZ2 78 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 RGL2O15211 777 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 NTRK1P04629 796 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 CES1P23141 567 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 RPS6KA3P51812 740 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 RPL38P63173 70 aaKnown RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 PLD1Q13393 1074 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 C15orf59Q2T9L4 293 aaPredicted RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 C12orf56Q8IXR9 622 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 FAR1Q8WVX9 515 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 ALG3Q92685 438 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 GPN1Q9HCN4 374 aaPredicted RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 PNPOQ9NVS9 261 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 C1orf167Q5SNV9 1468 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 RPTORQ8N122 1335 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 ITPK1Q13572 414 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 MED22Q15528 200 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 DDI2Q5TDH0 399 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 LGI2Q8N0V4 545 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 ANKRD52Q8NB46 1076 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 TLCD1Q96CP7 247 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 FAM163AQ96GL9 167 aaPredicted RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 PRMT6Q96LA8 375 aaPredicted RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 OSMRQ99650 979 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 PRDM12Q9H4Q4 367 aa13.02□□□□□ -0.32
RNF43-201ENST00000407977 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.02□□□□□ -0.32
RNF43-201ENST00000407977 SCAF8Q9UPN6 1271 aaKnown RBP13.02□□□□□ -0.32
RNF43-201ENST00000407977 RFXANKO14593 260 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 ELP6Q0PNE2 266 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 CBX3Q13185 183 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 MTX3Q5HYI7 312 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 FAM131AQ6UXB0 335 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 RNASE11Q8TAA1 199 aaKnown RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 ZNF607Q96SK3 696 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 FAM92AA1XBS5 289 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 PLOD3O60568 738 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 CCNHP51946 323 aaPredicted RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 BIKQ13323 160 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 PCBP1Q15365 356 aaKnown RBP eCLIP13.02□□□□□ -0.334e-6■■■■■ 41.5
RNF43-201ENST00000407977 GRIK4Q16099 956 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 FNBP1LQ5T0N5 605 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 DSELQ8IZU8 1212 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 TEX47Q8TBZ9 253 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 BSNDQ8WZ55 320 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 DPP7Q9UHL4 492 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 PEX16Q9Y5Y5 336 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 CPS1P31327 1500 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 CCDC189A1A4V9 331 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 PRMT5O14744 637 aaPredicted RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 TEX28O15482 410 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 ALDH2P05091 517 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 SDC2P34741 201 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 CRADDP78560 199 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 SPIBQ01892 262 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 IL18R1Q13478 541 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 ZACNQ401N2 412 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 APTXQ7Z2E3 356 aaKnown RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 COMMD2Q86X83 199 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
RNF43-201ENST00000407977 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.33
RNF43-201ENST00000407977 A0A0J9YYE9 177 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 LYPLA1O75608 230 aaPredicted RBP13.01□□□□□ -0.33
RNF43-201ENST00000407977 PSMD10O75832 226 aa13.01□□□□□ -0.33
RNF43-201ENST00000407977 THRBP10828 461 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms