RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 ZNF420Q8TAQ5 688 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PNPT1Q8TCS8 783 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ULK4Q96C45 1275 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SERAC1Q96JX3 654 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CDK5RAP1Q96SZ6 601 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 MED10Q9BTT4 135 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 OR2B2Q9GZK3 357 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 C1orf21Q9H246 121 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 AGO4Q9HCK5 861 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ADPRHL2Q9NX46 363 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DDX43Q9NXZ2 648 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 IFT80Q9P2H3 777 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ZNFX1Q9P2E3 1918 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RALGAPA2Q2PPJ7 1873 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 WDR27A2RRH5 827 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SPATA31C2B4DYI2 1134 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DENRO43583 198 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PGLSO95336 258 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CALCAP01258 141 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 S100A6P06703 90 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ITGALP20701 1170 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CYP4F2P78329 520 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 MYBPC1Q00872 1141 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CYP4F3Q08477 520 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TIMM50Q3ZCQ8 353 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DCAF12L1Q5VU92 463 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GARNL3Q5VVW2 1013 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ANKS1BQ7Z6G8 1248 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CENPLQ8N0S6 344 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SPERTQ8NA61 448 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SMG8Q8ND04 991 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 LSM14AQ8ND56 463 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 FBXO30Q8TB52 745 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DNAJC28Q9NX36 388 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TMEM161AQ9NX61 479 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ERGIC3Q9Y282 383 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 HSPB11Q9Y547 144 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ATP6AP2A0A1C7CYW4 349 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 STX16-NPEPL1H3BU86 382 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 VILLO15195 856 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ATP6AP2O75787 350 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 FADS2O95864 444 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CYP1A1P04798 512 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TSPAN19P0C672 248 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ERCC2P18074 760 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 IL32P24001 234 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PCSK6P29122 969 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CAPGP40121 348 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 HTR2BP41595 481 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 IDH3AP50213 366 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PLK1P53350 603 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SLC18A1P54219 525 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SPP2Q13103 211 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PWP1Q13610 501 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SF3B4Q15427 424 aaKnown RBP eCLIP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PYDC2Q56P42 97 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GK5Q6ZS86 529 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 OTOP1Q7RTM1 612 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 C2orf69Q8N8R5 385 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 OR2T34Q8NGX1 318 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 OR2T3Q8NH03 318 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SNX19Q92543 992 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 VCPIP1Q96JH7 1222 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GFM1Q96RP9 751 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CGREF1Q99674 301 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 HSD17B14Q9BPX1 270 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DHX33Q9H6R0 707 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ACSS2Q9NR19 701 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DNAJC11Q9NVH1 559 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 PTBP2Q9UKA9 531 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 AGO2Q9UKV8 859 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CNTNAP2Q9UHC6 1331 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 UBA6A0AVT1 1052 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ANKRD34BA5PLL1 514 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 A6NL46 340 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 KCNU1A8MYU2 1149 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TNFRSF10AO00220 468 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 MSH4O15457 936 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 AQP9O43315 295 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DYRK3O43781 588 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ICMTO60725 284 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CSDE1O75534 798 aaKnown RBP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RFPL2O75678 378 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TPPPO94811 219 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CYP1A2P05177 515 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 SLURP2P0DP57 97 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RCVRNP35243 200 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GPX6P59796 221 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 TP53BP2Q13625 1128 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 IKBKEQ14164 716 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 CSHL1Q14406 222 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 GRB14Q14449 540 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 RAB39AQ14964 217 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 FAM110CQ1W6H9 321 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ARHGEF16Q5VV41 709 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
HDAC9-203ENST00000406072 ZNF720Q7Z2F6 126 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms