RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HSPA4LO95757 839 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 CTSAP10619 480 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 EDN2P20800 178 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 HOXA7P31268 230 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 HOXA13P31271 388 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 NR4A2P43354 598 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 HDAC4P56524 1084 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 GHRHRQ02643 423 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TNFAIP1Q13829 316 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 HIST2H2ACQ16777 129 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM268Q5VZI3 342 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 KIAA0930Q6ICG6 404 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TSSK4Q6SA08 328 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 GLDNQ6ZMI3 551 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 IL17RCQ8NAC3 791 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 GDPD5Q8WTR4 605 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAR1Q8WVX9 515 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 PRPF31Q8WWY3 499 aaKnown RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 FCRL5Q96RD9 977 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 EDEM3Q9BZQ6 932 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 SIL1Q9H173 461 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 RABEP2Q9H5N1 569 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC6A13Q9NSD5 602 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 RRP7BPQ9NSQ0 103 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 ELOVL5Q9NYP7 299 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 WSB2Q9NYS7 404 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 PLK2Q9NYY3 685 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 FBXL17Q9UF56 701 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 MAFFQ9ULX9 164 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 TNFSF13BQ9Y275 285 aa5.12□□□□□ -1.59
HMGB1P13-201ENST00000406019 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 OR2A25A4D2G3 310 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 A8MV72 311 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 A8MXE2 369 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 RNF8O76064 485 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PLAUP00749 431 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 TFP02787 698 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC2A4P14672 509 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PTPN2P17706 415 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PTGER1P34995 402 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC15A1P46059 708 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 NRIP1P48552 1158 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PMS2P54278 862 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 RAD23AP54725 363 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 CLDN2P57739 230 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 HSF1Q00613 529 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC18A2Q05940 514 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SCARB2Q14108 478 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 RABEP1Q15276 862 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SHBQ15464 509 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PFKFB3Q16875 520 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 CXorf66Q5JRM2 361 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 KIAA1755Q5JYT7 1200 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 CC2D1BQ5T0F9 858 aaKnown RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 RBM44Q6ZP01 1051 aaKnown RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 NRACQ8N912 160 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM47BQ8NA70 645 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 OR4N2Q8NGD1 307 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PABPC5Q96DU9 382 aaKnown RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 ABHD1Q96SE0 405 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 ADPGKQ9BRR6 497 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 IFT27Q9BW83 186 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 LTB4R2Q9NPC1 389 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 MRGBPQ9NV56 204 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM184CQ9NVA4 438 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 ARL8BQ9NVJ2 186 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 TRNAU1APQ9NX07 287 aaKnown RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 C5AR2Q9P296 337 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 SEC63Q9UGP8 760 aaKnown RBP5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 PADI1Q9ULC6 663 aa5.11□□□□□ -1.59
HMGB1P13-201ENST00000406019 CXorf65A6NEN9 183 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM157AC9JC47 383 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 EBAG9O00559 213 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CTDSP2O14595 271 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 INPPL1O15357 1258 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 PAPSS1O43252 624 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 HCRTR2O43614 444 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 IL1AP01583 271 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 FGF2P09038 288 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 PRF1P14222 555 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 SAT1P21673 171 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 TACR3P29371 465 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 RYKP34925 604 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 MMP13P45452 471 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CENPAP49450 140 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CYP2J2P51589 502 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 MRPL12P52815 198 aaKnown RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 F2RL1P55085 397 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 PKP1Q13835 747 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 SOWAHCQ53LP3 525 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 EARS2Q5JPH6 523 aaKnown RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 C1orf141Q5JVX7 400 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 ERMARDQ5T6L9 678 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 PMS2CLQ68D20 193 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 ADALQ6DHV7 355 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 HMBOX1Q6NT76 420 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CRELD2Q6UXH1 353 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 CLEC17AQ6ZS10 378 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 GSTA5Q7RTV2 222 aa5.1□□□□□ -1.59
HMGB1P13-201ENST00000406019 TRIM74Q86UV6 250 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms