RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 GABPB1Q06547 395 aaPredicted RBP21.15■□□□□ 0.98
TPM1-208ENST00000404484 KIAA0907Q7Z7F0 614 aaPredicted RBP21.15■□□□□ 0.98
TPM1-208ENST00000404484 SRRM1Q8IYB3 904 aaKnown RBP21.15■□□□□ 0.98
TPM1-208ENST00000404484 GABPB2Q8TAK5 448 aaPredicted RBP21.15■□□□□ 0.98
TPM1-208ENST00000404484 PEX13Q92968 403 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 MFSD3Q96ES6 412 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 SMYD2Q9NRG4 433 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 FBXO10Q9UK96 956 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 CA14Q9ULX7 337 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 RAI2Q9Y5P3 530 aa21.15■□□□□ 0.98
TPM1-208ENST00000404484 GJB3O75712 270 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 SNRPAP09012 282 aaKnown RBP21.14■□□□□ 0.98
TPM1-208ENST00000404484 NMBRP28336 390 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 ATP1A2P50993 1020 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 ECT2LQ008S8 904 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 KCNMB4Q86W47 210 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 FBXL6Q8N531 539 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 SMC6Q96SB8 1091 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 CPNE1Q99829 537 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 SELENOSQ9BQE4 189 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 TRABDQ9H4I3 376 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 C20orf96Q9NUD7 363 aaPredicted RBP21.14■□□□□ 0.98
TPM1-208ENST00000404484 WDFY4Q6ZS81 3184 aa21.14■□□□□ 0.98
TPM1-208ENST00000404484 MYOFQ9NZM1 2061 aa21.14■□□□□ 0.97
TPM1-208ENST00000404484 SRCP12931 536 aa21.14■□□□□ 0.97
TPM1-208ENST00000404484 POLR2EP19388 210 aaKnown RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 GDI1P31150 447 aa21.14■□□□□ 0.97
TPM1-208ENST00000404484 SNRPD1P62314 119 aaKnown RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 ASTLQ6HA08 431 aaPredicted RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 KIAA0930Q6ICG6 404 aaPredicted RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 PCDH20Q8N6Y1 951 aaKnown RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 ALKBH8Q96BT7 664 aaKnown RBP21.14■□□□□ 0.97
TPM1-208ENST00000404484 K7ERQ8 282 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 PIAS1O75925 651 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 GSRP00390 522 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 MT-ND3P03897 115 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 ERVK-10P10266 1014 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 BRAFP15056 766 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 GP5P40197 560 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 DGKGP49619 791 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 RPL26P61254 145 aaKnown RBP21.13■□□□□ 0.97
TPM1-208ENST00000404484 DNAJC3Q13217 504 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 GALNT3Q14435 633 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 SLC44A4Q53GD3 710 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 TSTD2Q5T7W7 516 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 YAF2Q8IY57 180 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 BRSK1Q8TDC3 778 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 RMDN1Q96DB5 314 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 TM6SF2Q9BZW4 377 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 MFSD1Q9H3U5 465 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 BRD9Q9H8M2 597 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 SSU72Q9NP77 194 aaKnown RBP21.13■□□□□ 0.97
TPM1-208ENST00000404484 TREX1Q9NSU2 369 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 RIMKLBQ9ULI2 386 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 RPL26L1Q9UNX3 145 aaKnown RBP21.13■□□□□ 0.97
TPM1-208ENST00000404484 SMG5Q9UPR3 1016 aaKnown RBP21.13■□□□□ 0.97
TPM1-208ENST00000404484 CHKBQ9Y259 395 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 SLC27A6Q9Y2P4 619 aa21.13■□□□□ 0.97
TPM1-208ENST00000404484 ZNF318Q5VUA4 2279 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 SMAD6O43541 496 aaKnown RBP21.12■□□□□ 0.97
TPM1-208ENST00000404484 SOCS5O75159 536 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 ASLP04424 464 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 VASPP50552 380 aaPredicted RBP21.12■□□□□ 0.97
TPM1-208ENST00000404484 PFKPQ01813 784 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 FCHO2Q0JRZ9 810 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 MSLNQ13421 630 aaPredicted RBP21.12■□□□□ 0.97
TPM1-208ENST00000404484 ATXN7L2Q5T6C5 722 aaPredicted RBP21.12■□□□□ 0.97
TPM1-208ENST00000404484 MBLAC2Q68D91 279 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 TRIM68Q6AZZ1 485 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 C22orf39Q6P5X5 142 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 ADIPOR2Q86V24 386 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 UNC5BQ8IZJ1 945 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 CPA6Q8N4T0 437 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 NAT16Q8N8M0 369 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 OR2AP1Q8NGE2 309 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 FAM83CQ9BQN1 747 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 CAPS2Q9BXY5 557 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 ATP13A3Q9H7F0 1226 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 ARHGEF3Q9NR81 526 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 PSD3Q9NYI0 1048 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.12■□□□□ 0.973e-7■■□□□ 13.4
TPM1-208ENST00000404484 SLC8A2Q9UPR5 921 aa21.12■□□□□ 0.97
TPM1-208ENST00000404484 MROH6A6NGR9 719 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 CRTAMO95727 393 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 ARSAP15289 507 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 NNMTP40261 264 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 BCL2L1Q07817 233 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 TRAF2Q12933 501 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 ARMC12Q5T9G4 340 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 GRTP1Q5TC63 336 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 PACS1Q6VY07 963 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 FLCNQ8NFG4 579 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 CALML6Q8TD86 181 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 BLOC1S5Q8TDH9 187 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 MZB1Q8WU39 189 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 TUBGCP5Q96RT8 1024 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 FAM167BQ9BTA0 163 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 HACD3Q9P035 362 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 PCDHGC4Q9Y5F7 938 aa21.11■□□□□ 0.97
TPM1-208ENST00000404484 KIF26AQ9ULI4 1882 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms