RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 EIF2B3Q9NR50 452 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-204ENST00000403904 PHTF1Q9UMS5 762 aa33.5■■■□□ 2.95
CSNK1E-204ENST00000403904 CUL9Q8IWT3 2517 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 KMT2EQ8IZD2 1858 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 HEXIM1O94992 359 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 ATXN1LP0C7T5 689 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 ADRB3P13945 408 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 ITIH2P19823 946 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 DMWDQ09019 674 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 SLC1A5Q15758 541 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 SIRPB2Q5JXA9 342 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 TMEM31Q5JXX7 168 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 PIP5KL1Q5T9C9 394 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 RNASEH2BQ5TBB1 312 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 AGBL4Q5VU57 503 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 SNF8Q96H20 258 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 DMGDHQ9UI17 866 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 WDFY4Q6ZS81 3184 aa33.49■■■□□ 2.95
CSNK1E-204ENST00000403904 UPK3BL1B0FP48 263 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 ANKRD66B4E2M5 251 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 UPK3BL2E5RIL1 263 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 RIOK3O14730 519 aaKnown RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 SUN1O94901 812 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 CTPS1P17812 591 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 TPSB2P20231 275 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 XPAP23025 273 aaPredicted RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 GRIA1P42261 906 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 MAGEA6P43360 314 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 RPL26P61254 145 aaKnown RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 PTPRRQ15256 657 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 TPSAB1Q15661 275 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 NAPEPLDQ6IQ20 393 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 CCDC70Q6NSX1 233 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 USP30Q70CQ3 517 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 FAM124AQ86V42 546 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 PPIL6Q8IXY8 311 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 PIH1D1Q9NWS0 290 aaKnown RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 USP36Q9P275 1121 aaKnown RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 RPL26L1Q9UNX3 145 aaKnown RBP33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 NCKAP1Q9Y2A7 1128 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 NUMA1Q14980 2115 aa33.48■■■□□ 2.95
CSNK1E-204ENST00000403904 ABL2P42684 1182 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 CSTF1Q05048 431 aaKnown RBP33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 QPCTQ16769 361 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 NAT8LQ8N9F0 302 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 TMEM63AO94886 807 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 SEC31AO94979 1220 aaKnown RBP33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 ALPIP09923 528 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 HLA-DPA1P20036 260 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 GRIA4P48058 902 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 SEMG2Q02383 582 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 SFSWAPQ12872 951 aaKnown RBP33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 TEX35Q5T0J7 233 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 DENND5AQ6IQ26 1287 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 PCGF5Q86SE9 256 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 KBTBD6Q86V97 674 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 OR52K1Q8NGK4 314 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 PCDH12Q9NPG4 1184 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 CYP8B1Q9UNU6 501 aa33.47■■■□□ 2.95
CSNK1E-204ENST00000403904 RHOXF2BP0C7M4 288 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 TDGF1P13385 188 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 GUCY2DQ02846 1103 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 TRADDQ15628 312 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 LINC00523Q86TU6 105 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 RLN3Q8WXF3 142 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 FAM131CQ96AQ9 280 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 RHOXF2Q9BQY4 288 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 FZD4Q9ULV1 537 aa33.46■■■□□ 2.95
CSNK1E-204ENST00000403904 A0A0J9YYE9 177 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 ESYT3A0FGR9 886 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 GOLGA8MH3BSY2 632 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 AXIN1O15169 862 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 TRBC1P01850 177 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 HOXA6P31267 233 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 ITGA8P53708 1063 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 CDK16Q00536 496 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 CCDC15Q0P6D6 951 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 PPP1R21Q6ZMI0 780 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 ITM2BQ9Y287 266 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 PPIL1Q9Y3C6 166 aa33.45■■■□□ 2.95
CSNK1E-204ENST00000403904 A8MX80 341 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 FGF1P05230 155 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 PIRTP0C851 137 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 TAS2R38P59533 333 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 FAM193AP78312 1265 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 EML5Q05BV3 1969 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 NDUFAF2Q8N183 169 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 FRMD1Q8N878 549 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 SCRN2Q96FV2 425 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 ARNT2Q9HBZ2 717 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 GGT7Q9UJ14 662 aa33.44■■■□□ 2.94
CSNK1E-204ENST00000403904 SPINT1O43278 529 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 ZNF217O75362 1048 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 HNF1BP35680 557 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 USP45Q70EL2 814 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 DNAAF3Q8N9W5 541 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 OR14C36Q8NHC7 312 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 RAB7BQ96AH8 199 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 C1QTNF1Q9BXJ1 281 aa33.43■■■□□ 2.94
CSNK1E-204ENST00000403904 EPB41L5Q9HCM4 733 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms