RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HIST2H2ACQ16777 129 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 SGO1Q5FBB7 561 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZNF626Q68DY1 528 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 CTU1Q7Z7A3 348 aaKnown RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 UBE2Q1Q7Z7E8 422 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ARHGAP12Q8IWW6 846 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM185AQ8N0U4 392 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZNF548Q8NEK5 533 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 MCPH1Q8NEM0 835 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ENGASEQ8NFI3 743 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 TMEM18Q96B42 140 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM149B1Q96BN6 582 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 WDR77Q9BQA1 342 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 SMARCAD1Q9H4L7 1026 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 SH2D4AQ9H788 454 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 SLC28A3Q9HAS3 691 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 MAGEE1Q9HCI5 957 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 BPIFA1Q9NP55 256 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 TRNAU1APQ9NX07 287 aaKnown RBP4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 FLRT1Q9NZU1 646 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 HEY2Q9UBP5 337 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 POLG2Q9UHN1 485 aa4.04□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 FAM237AA0A1B0GTK4 181 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 SYNDIG1LA6NDD5 238 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 A8MV72 311 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 TLX3O43711 291 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 TMCC2O75069 709 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 BEST1O76090 585 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 CELA2AP08217 269 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 CHRNB2P17787 502 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 KELP23276 732 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 RRM1P23921 792 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 PIGAP37287 484 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 THPOP40225 353 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 HMGA2P52926 109 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 GALCP54803 685 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 CDH12P55289 794 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 P2RX3P56373 397 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ITGADQ13349 1161 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ACVR2BQ13705 512 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 DRAP1Q14919 205 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 C2orf68Q2NKX9 166 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 MMEL1Q495T6 779 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 PLEKHO1Q53GL0 409 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 HEPHL1Q6MZM0 1159 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 SHC4Q6S5L8 630 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 SLC16A12Q6ZSM3 486 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 PRIMA1Q86XR5 153 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 TMC8Q8IU68 726 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 DENND6AQ8IWF6 608 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ZBTB2Q8N680 514 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 OR14L1PQ8NHC6 308 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 PRSS3P2Q8NHM4 247 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ARRDC2Q8TBH0 407 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 NTN5Q8WTR8 489 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 INPP5DQ92835 1189 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ELMOD3Q96FG2 381 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 APOLD1Q96LR9 279 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 MAP7D2Q96T17 732 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 MSTO1Q9BUK6 570 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 SPRTNQ9H040 489 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 CDT1Q9H211 546 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 RANGRFQ9HD47 186 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 ASAH2Q9NR71 780 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 RNF146Q9NTX7 359 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 CISD1Q9NZ45 108 aaKnown RBP4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 DLGAP2Q9P1A6 1054 aa4.03□□□□□ -1.76
HMGB1P17-201ENST00000403495 C1orf226A1L170 272 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 TTC36A6NLP5 189 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 I6L893 689 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 P4HA2O15460 535 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 IPO7O95373 1038 aaKnown RBP4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 PGM3O95394 542 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 RB1P06400 928 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 CYC1P08574 325 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 PCNAP12004 261 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 GABRB1P18505 474 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 PMS2P54278 862 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 IFI35P80217 286 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 FAM27E3Q08E93 113 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 NIPAL4Q0D2K0 466 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 BECN1Q14457 450 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 SRSF7Q16629 238 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 TCTN1Q2MV58 587 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 ASTE1Q2TB18 679 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 MTX3Q5HYI7 312 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 MFSD4BQ5TF39 518 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 TMCO3Q6UWJ1 677 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 LINC00346Q8IVM7 164 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 TAGAPQ8N103 731 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 NELL1Q92832 810 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 KLHL31Q9H511 634 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 PLSCR4Q9NRQ2 329 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 CYSLTR2Q9NS75 346 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 SETD4Q9NVD3 440 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 NENFQ9UMX5 172 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 PCDHA12Q9UN75 941 aa4.02□□□□□ -1.77
HMGB1P17-201ENST00000403495 R3HDM2Q9Y2K5 976 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms