RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CLCN1P35523 988 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 USP8P40818 1118 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MAZP56270 477 aaKnown RBP12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MTA1Q13330 715 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LRRC14Q15048 493 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DPY19L2P1Q6NXN4 242 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LRRC31Q6UY01 552 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SLC47A2Q86VL8 602 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C17orf82Q86X59 251 aaPredicted RBP12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM131BQ86XD5 332 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GKN2Q86XP6 184 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM26EQ8N5C1 309 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FAM46DQ8NEK8 389 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SCG3Q8WXD2 468 aaKnown RBP12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MIB2Q96AX9 1013 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 HAPLN3Q96S86 360 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CMKLR1Q99788 373 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM168Q9H0V1 697 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RMND1Q9NWS8 449 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LRIT1Q9P2V4 623 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 KLQ9UEF7 1012 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DNAI1Q9UI46 699 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MAN1B1Q9UKM7 699 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ST14Q9Y5Y6 855 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 B3GALT1Q9Y5Z6 326 aa12□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ESPL1Q14674 2120 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SHANK1Q9Y566 2161 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 IGHV5-10-1A0A0J9YXX1 117 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 B4DGG1 531 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMCC1O94876 653 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PIGNO95427 931 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FUCA1P04066 466 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PNLIPP16233 465 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 BLKP51451 505 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MARSP56192 900 aaKnown RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 STX17P56962 302 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CETN1Q12798 172 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SERINC3Q13530 473 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SLC25A52Q3SY17 297 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C14orf28Q4W4Y0 310 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 KLHL10Q6JEL2 608 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TRIM65Q6PJ69 517 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 XYLT1Q86Y38 959 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NRROSQ86YC3 692 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OR6C4Q8NGE1 309 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PTCD2Q8WV60 388 aaKnown RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM159Q96B96 161 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DHTKD1Q96HY7 919 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CFAP57Q96MR6 1250 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LGR4Q9BXB1 951 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SRRTQ9BXP5 876 aaKnown RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SPRY4Q9C004 299 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SIX2Q9NPC8 291 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SPATS2LQ9NUQ6 558 aaKnown RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM9Q9P0T7 183 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PPARGC1AQ9UBK2 798 aaKnown RBP11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TUBD1Q9UJT1 453 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM59LQ9UK28 342 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PCDHB11Q9Y5F2 797 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DGKBQ9Y6T7 804 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OTOGQ6ZRI0 2925 aa11.99□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 STMND1H3BQB6 276 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 FOXN3O00409 490 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PSMA7O14818 248 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 MTSS1O43312 755 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 BUB1BO60566 1050 aaPredicted RBP11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PCCBP05166 539 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NR1D1P20393 614 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CD82P27701 267 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CD1CP29017 333 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CSF2RBP32927 897 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 GABRB2P47870 512 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SNRPD1P62314 119 aaKnown RBP11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NCAPHQ15003 741 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 AMZ1Q400G9 498 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ATP1A1-AS1Q5TC04 95 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SPECC1LQ69YQ0 1117 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ZNF438Q7Z4V0 828 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TAF8Q7Z7C8 310 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 IRF2BP1Q8IU81 584 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NELFBQ8WX92 580 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 SMARCE1Q969G3 411 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CCDC74BQ96LY2 380 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 NSMCE3Q96MG7 304 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 WDR92Q96MX6 357 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OSBPL1AQ9BXW6 950 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 B3GNT4Q9C0J1 378 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 OCIAD1Q9NX40 245 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 RRN3Q9NYV6 651 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 LHX3Q9UBR4 397 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 ANAPC2Q9UJX6 822 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 PCDHGA3Q9Y5H0 932 aa11.98□□□□□ -0.49
SPTLC1P3-201ENST00000403408 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 CXorf51AA0A1B0GTR3 108 aa11.97□□□□□ -0.49
SPTLC1P3-201ENST00000403408 TMEM110-MUSTN1A8MSY1 372 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms