RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 PIWIL4Q7Z3Z4 852 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 GALNT7Q86SF2 657 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 TMEM173Q86WV6 379 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 STON2Q8WXE9 905 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 CDYLQ9Y232 598 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 VWA7Q9Y334 891 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 S1PR4O95977 384 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 LTA4HP09960 611 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 CCDC166P0CW27 439 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 THRAP10827 490 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PRAMEP78395 509 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 SMARCB1Q12824 385 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PDCD2Q16342 344 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 CFAP52Q8N1V2 620 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 CPSF7Q8N684 471 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PPFIBP2Q8ND30 876 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 PXYLP1Q8TE99 480 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 TSPAN17Q96FV3 270 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 CCDC28BQ9BUN5 200 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 MARCH4Q9P2E8 410 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 LRFN2Q9ULH4 789 aa17.05■□□□□ 0.32
DNMT3A-205ENST00000402667 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 OR51F1A6NGY5 319 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 SLC38A8A6NNN8 435 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 FKBP6O75344 327 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 INHAP05111 366 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 GALTP07902 379 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 KCNA5P22460 613 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 PFKPQ01813 784 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TBL3Q12788 808 aaKnown RBP17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 ANO7Q6IWH7 933 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 LGI2Q8N0V4 545 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 ANKRD49Q8WVL7 239 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 UBXN10Q96LJ8 280 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TTC1Q99614 292 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 ZNF385DQ9H6B1 395 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 PPM1HQ9ULR3 514 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TMEM233B4DJY2 109 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 H7C4K7 107 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 ATF6P18850 670 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 KPNA1P52294 538 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 BLMHQ13867 455 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TMEM198Q66K66 360 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 NXNQ6DKJ4 435 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 AAGABQ6PD74 315 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 PRSS55Q6UWB4 352 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 EFCAB3Q8N7B9 438 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 IFT43Q96FT9 208 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TBATAQ96M53 351 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 TET1Q8NFU7 2136 aa17.04■□□□□ 0.32
DNMT3A-205ENST00000402667 A0A0D9SEW6 157 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 F5H5T6 163 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 MAP3K7O43318 606 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 BAG2O95816 211 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 PPARGP37231 505 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ELAVL2Q12926 359 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ZNF235Q14590 738 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 TCTN1Q2MV58 587 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 PPM1LQ5SGD2 360 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 SH2D4BQ5SQS7 431 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 KLC3Q6P597 504 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ANKS3Q6ZW76 656 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 SNX32Q86XE0 403 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 HPS6Q86YV9 775 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 FBXW8Q8N3Y1 598 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CCDC124Q96CT7 223 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 FEM1CQ96JP0 617 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CATSPER2Q96P56 530 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 TTPALQ9BTX7 342 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CYP4F12Q9HCS2 524 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 S100A14Q9HCY8 104 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 POMPQ9Y244 141 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 A8MT66 165 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 AIM2O14862 343 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 SLC22A2O15244 555 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 IPO13O94829 963 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 SNUPNO95149 360 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 RBP1P09455 135 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 SLC6A4P31645 630 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CDKN2DP55273 166 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ACVR1Q04771 509 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CCNIQ14094 377 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 PTPRCAPQ14761 206 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ACAP2Q15057 778 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 ZRSR2Q15696 482 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 C5orf22Q49AR2 442 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 TMEM207Q6UWW9 146 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 LMNTD2Q8IXW0 634 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 RP9Q8TA86 221 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 BLOC1S5Q8TDH9 187 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 C2orf15Q8WU43 125 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 BCL7CQ8WUZ0 217 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 CCDC126Q96EE4 140 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 HMX1Q9NP08 348 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 NDE1Q9NXR1 346 aa17.03■□□□□ 0.32
DNMT3A-205ENST00000402667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms