RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 H2AFYO75367 372 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 RPP40O75818 363 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 TMCC1O94876 653 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 KLHL2O95198 593 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 WISP3O95389 354 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 SCNN1BP51168 640 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 PRKAA2P54646 552 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ERVFC1P60507 584 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ABCE1P61221 599 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 FPGSQ05932 587 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 DLG1Q12959 904 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ITGA9Q13797 1035 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 TBATAQ96M53 351 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 RAD9AQ99638 391 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 OXSMQ9NWU1 459 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 LSM7Q9UK45 103 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 RUVBL2Q9Y230 463 aaKnown RBP12.33□□□□□ -0.44
CLIP4-203ENST00000401617 ARL5AQ9Y689 179 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 GBF1Q92538 1859 aa12.33□□□□□ -0.44
CLIP4-203ENST00000401617 C2orf71A6NGG8 1288 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TMEM114B3SHH9 223 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TRIM13O60858 407 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 LYPLA1O75608 230 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 NQO1P15559 274 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 ALOX15P16050 662 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 BMPR1AP36894 532 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 ZNF140P52738 457 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 PGGT1BP53609 377 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 EPHA5P54756 1037 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 PRAMEP78395 509 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 RALGPS1Q5JS13 557 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 RBM20Q5T481 1227 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 FBXW10Q5XX13 1052 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 NAPRTQ6XQN6 538 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 RTL10Q7L3V2 364 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 PTAR1Q7Z6K3 402 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 CARNMT1Q8N4J0 409 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 DCAF4L2Q8NA75 395 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 OR6P1Q8NGX9 317 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 PIWIL2Q8TC59 973 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 WFDC5Q8TCV5 224 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 BADQ92934 168 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 ELMO2Q96JJ3 720 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 EMILIN2Q9BXX0 1053 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 NLE1Q9NVX2 485 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 BPTFQ12830 3046 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TRAV19A0A0A6YYK7 116 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TYW5A2RUC4 315 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 SERPINB3P29508 390 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 AVPR1AP37288 418 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TAF1AQ15573 450 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 ELMOD1Q8N336 334 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 FSTL5Q8N475 847 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 GPATCH11Q8N954 259 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 MRPL43Q8N983 215 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 NXNL1Q96CM4 212 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 KLHL29Q96CT2 875 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 SLC7A6OSQ96CW6 309 aaPredicted RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TSNARE1Q96NA8 513 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 OLFM1Q99784 485 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 WWP1Q9H0M0 922 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 LRMDAQ9H2I8 198 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
CLIP4-203ENST00000401617 TASP1Q9H6P5 420 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 VPS51Q9UID3 782 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 DNAJC16Q9Y2G8 782 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 SPO11Q9Y5K1 396 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 MYOFQ9NZM1 2061 aa12.32□□□□□ -0.44
CLIP4-203ENST00000401617 MYO7AQ13402 2215 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CCDC162PA2VCL2 907 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CCL22O00626 93 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 ZNF195O14628 629 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 SCAMP3O14828 347 aaKnown RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CRTAMO95727 393 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 GLUD1P00367 558 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 GOT2P00505 430 aaKnown RBP12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CKMP06732 381 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 PDHA1P08559 390 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 SAT1P21673 171 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 CSKP41240 450 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 LBX1P52954 281 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 AQP5P55064 265 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 ZNF460Q14592 562 aa12.31□□□□□ -0.44
CLIP4-203ENST00000401617 KRT72Q14CN4 511 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms