RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AP2A1O95782 977 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ERFP50548 548 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CTBP2P56545 445 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MROH9Q5TGP6 573 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 LLGL2Q6P1M3 1020 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MUC13Q9H3R2 512 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 PCNX2A6NKB5 2137 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RBL1P28749 1068 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RRAS2P62070 204 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 AGKQ53H12 422 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C6orf52Q5T4I8 152 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C1orf186Q6ZWK4 172 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 OR56A4Q8NGH8 313 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TGFBRAP1Q8WUH2 860 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RAB9BQ9NP90 201 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 POMT1Q9Y6A1 747 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TIE1P35590 1138 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 CDK7P50613 346 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 USP11P51784 963 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 DSG2Q14126 1118 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZSCAN4Q8NAM6 433 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 LRRC46Q96FV0 321 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 KCTD10Q9H3F6 313 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF226Q9NYT6 803 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 UGT2B17O75795 530 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 MOCS2O96007 188 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ETS1P14921 441 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 ZSCAN1Q8NBB4 408 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 RERGQ96A58 199 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 C17orf62Q9BQA9 187 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 TAS2R3Q9NYW6 316 aa8.63□□□□□ -1.03
CACNA1C-220ENST00000399655 GMDSO60547 372 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 SLC6A4P31645 630 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CDKN2CP42773 168 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 PMPCAQ10713 525 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 STARD3Q14849 445 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CRY2Q49AN0 593 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 OR4Q3Q8NH05 313 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 GFM1Q96RP9 751 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 SAMD10Q9BYL1 202 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 TAS2R1Q9NYW7 299 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CYB5BO43169 146 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CRABP2P29373 138 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RPL22P35268 128 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 TRIM23P36406 574 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 LSM12Q3MHD2 195 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 C20orf194Q5TEA3 1177 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FAM91A1Q658Y4 838 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RIPOR1Q6ZS17 1223 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 SCUBE3Q8IX30 993 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 HTRA1Q92743 480 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 BORCS8Q96FH0 119 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 BTBD10Q9BSF8 475 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ABI3Q9P2A4 366 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 KCNH4Q9UQ05 1017 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FARS2O95363 451 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 GEMP55040 296 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ARHGAP11AQ6P4F7 1023 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 IFNL3Q8IZI9 196 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 PGAM4Q8N0Y7 254 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF557Q8N988 423 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 TMEM159Q96B96 161 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CDCA5Q96FF9 252 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FNDC11Q9BVV2 318 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 LGR4Q9BXB1 951 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 POMKQ9H5K3 350 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 TLR6Q9Y2C9 796 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 EFCAB7A8K855 629 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 STAG3L2P0CL84 134 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RARGP13631 454 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RAG1P15918 1043 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ACSL1P33121 698 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 HALP42357 657 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RENBPP51606 427 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 CCNHP51946 323 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 PTPN11Q06124 597 aaPredicted RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FRRS1Q6ZNA5 592 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ANKRA2Q9H9E1 313 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 DISC1C4P0D8 188 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 PCSK7Q16549 785 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 RBM48Q5RL73 367 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FBXW8Q8N3Y1 598 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 SMARCD2Q92925 531 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 TSNAXQ99598 290 aaKnown RBP8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ZNF286AQ9HBT8 521 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 LAMP5Q9UJQ1 280 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 KIF21AQ7Z4S6 1674 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 FPGTO14772 594 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 ADAMTS3O15072 1205 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 LCN1P31025 176 aa8.62□□□□□ -1.03
CACNA1C-220ENST00000399655 USP43Q70EL4 1123 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms