RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PFKPQ01813 784 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 USP4Q13107 963 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KPNB1Q14974 876 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HERC3Q15034 1050 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CCDC6Q16204 474 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ACSBG2Q5FVE4 666 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HECTD2Q5U5R9 776 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RFWD3Q6PCD5 774 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CNSTQ6PJW8 725 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ATG14Q6ZNE5 492 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OR6P1Q8NGX9 317 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RP9Q8TA86 221 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ACTRT2Q8TDY3 377 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GIPC2Q8TF65 315 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HEXDCQ8WVB3 486 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HDAC10Q969S8 669 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ASB2Q96Q27 587 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IGSF5Q9NSI5 407 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ANGPTL2Q9UKU9 493 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 VPS9D1Q9Y2B5 631 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 E2F8A0AVK6 867 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RGSL1A5PLK6 1076 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CCNT2O60583 730 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RPP40O75818 363 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IPO13O94829 963 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 VHLP40337 213 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GATMP50440 423 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 BTKQ06187 659 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KLF10Q13118 480 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZNF177Q13360 481 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TECRLQ5HYJ1 363 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 RALGPS1Q5JS13 557 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KDELC2Q7Z4H8 507 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MFN1Q8IWA4 741 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GPR65Q8IYL9 337 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IGSF21Q96ID5 467 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 THTPAQ9BU02 230 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 INTS10Q9NVR2 710 aaKnown RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SAGE1Q9NXZ1 904 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 UBA2Q9UBT2 640 aaPredicted RBP17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CDYLQ9Y232 598 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TBC1D30Q9Y2I9 924 aa17.81■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CHD5Q8TDI0 1954 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 A0A1B0GVM2 712 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TCAF2A6NFQ2 919 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PFDN6O15212 129 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 WISP3O95389 354 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HOXD9P28356 352 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OR1D2P34982 312 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ACVRL1P37023 503 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 AVPR1AP37288 418 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ALDH1A3P47895 512 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PTDSS1P48651 473 aaKnown RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 KCNQ1P51787 676 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OXCT1P55809 520 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 VEPH1Q14D04 833 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ACCSLQ4AC99 568 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ADGRF1Q5T601 910 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 COL13A1Q5TAT6 717 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PRSS55Q6UWB4 352 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ADGRG6Q86SQ4 1221 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MAB21L3Q8N8X9 362 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 JADE3Q92613 823 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PPP1R12CQ9BZL4 782 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HIPK3Q9H422 1215 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PAK6Q9NQU5 681 aaPredicted RBP17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 STOML2Q9UJZ1 356 aa17.8■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GRID2O43424 1007 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 COX4I1P13073 169 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CPA2P48052 419 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 GLRBP48167 497 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SUOXP51687 545 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 AP2B1P63010 937 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NFKB2Q00653 900 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 DLG1Q12959 904 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IKBKEQ14164 716 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SLC9B1Q4ZJI4 515 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 IL31Q6EBC2 164 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PGM2L1Q6PCE3 622 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TRIM67Q6ZTA4 783 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 HERC6Q8IVU3 1022 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PPFIBP2Q8ND30 876 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 MAELQ96JY0 434 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 TRIB3Q96RU7 358 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 CINPQ9BW66 212 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 SLC7A8Q9UHI5 535 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 OGDHLQ9ULD0 1010 aa17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 PRPF19Q9UMS4 504 aaKnown RBP17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 ZFP37Q9Y6Q3 630 aaPredicted RBP17.79■□□□□ 0.44
HLA-DQB1-204ENST00000399084 A0A088AWK7 358 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
HLA-DQB1-204ENST00000399084 H3BNC9 293 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms