RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 RIOK3O14730 519 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 FZD6O60353 706 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 PMPCBO75439 489 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 RETP07949 1114 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 CCNG2Q16589 344 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 WDR45BQ5MNZ6 344 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 PAPD7Q5XG87 772 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 ERAP2Q6P179 960 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 DCLK2Q8N568 766 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 PRELID2Q8N945 189 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 SPATA13Q96N96 652 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 HINFPQ9BQA5 517 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 SMOC1Q9H4F8 434 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 PCDH9Q9HC56 1237 aa25.53■■□□□ 1.68
TMEM55B-202ENST00000398020 TSPAN6O43657 245 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PRLP01236 227 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 CTPS1P17812 591 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 TCP1P17987 556 aaKnown RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 CCR5P51681 352 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 KCTD19Q17RG1 926 aaPredicted RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 TRIM69Q86WT6 500 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 HORMAD1Q86X24 394 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 LPCAT1Q8NF37 534 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PIH1D2Q8WWB5 315 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 OXNAD1Q96HP4 312 aaPredicted RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 CAPZA3Q96KX2 299 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 FCRL5Q96RD9 977 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 GBA3Q9H227 469 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PILRBQ9UKJ0 227 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 TTC7AQ9ULT0 858 aaPredicted RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 LATO43561 262 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 MMP20O60882 483 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 ALPIP09923 528 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PRLRP16471 622 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 CA4P22748 312 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PSMB4P28070 264 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 MMP12P39900 470 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 MPLP40238 635 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 ETF1P62495 437 aaKnown RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 ELP6Q0PNE2 266 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 NEK5Q6P3R8 708 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 SYT10Q6XYQ8 523 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 ZCCHC9Q8N567 271 aaKnown RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 DNASE2BQ8WZ79 361 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 SPOCK2Q92563 424 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 TADA1Q96BN2 335 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 FEM1CQ96JP0 617 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 C16orf45Q96MC5 204 aaPredicted RBP25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 GORASP1Q9BQQ3 440 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 PHTF1Q9UMS5 762 aa25.52■■□□□ 1.68
TMEM55B-202ENST00000398020 EP300Q09472 2414 aaPredicted RBP25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 PLXNA2O75051 1894 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 A0A1W2PQ67 120 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 CFAP69A5D8W1 941 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 C5orf60A6NFR6 353 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 IGLON5A6NGN9 336 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 CES2O00748 559 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 IFNB1P01574 187 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 KCNJ1P48048 391 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 SUOXP51687 545 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 EPHB1P54762 984 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 GALNT3Q14435 633 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 ZNF284Q2VY69 593 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 ITPRIPL1Q6GPH6 555 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 PRUNE1Q86TP1 453 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 SYT12Q8IV01 421 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 TAB3Q8N5C8 712 aaPredicted RBP25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 ACTRT1Q8TDG2 376 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 ORAI3Q9BRQ5 295 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 B4GALT6Q9UBX8 382 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 SAR1BQ9Y6B6 198 aa25.51■■□□□ 1.67
TMEM55B-202ENST00000398020 TRPM6Q9BX84 2022 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 A0A0U1RQS6 177 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 A0A1W2PPC4 97 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 SLC31A1O15431 190 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 OPHN1O60890 802 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 CD27P26842 260 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 RPS21P63220 83 aaKnown RBP25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 SPEM2Q0P670 501 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 TMEM259Q4ZIN3 620 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 KIAA1161Q6NSJ0 714 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 ARHGEF18Q6ZSZ5 1173 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 CXorf40AQ8TE69 158 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 RUBCNQ92622 972 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 NAP1L3Q99457 506 aaPredicted RBP25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 MYOCQ99972 504 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 FAM153AQ9UHL3 310 aa25.5■■□□□ 1.67
TMEM55B-202ENST00000398020 PATE3B3GLJ2 98 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 ITGAVP06756 1048 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 FGL2Q14314 439 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 RIF1Q5UIP0 2472 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 FZD3Q9NPG1 666 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 COQ6Q9Y2Z9 468 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 PCDHGA5Q9Y5G8 931 aa25.49■■□□□ 1.67
TMEM55B-202ENST00000398020 NPIPB15A6NHN6 443 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 GOLGA8CPA6NN73 597 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 GFRA3O60609 400 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 GCATO75600 419 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 ZNF189O75820 626 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 ETS1P14921 441 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms