RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TREX1Q9NSU2 369 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 STARD13Q9Y3M8 1113 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 WASF2Q9Y6W5 498 aa27.67■■■□□ 2.02
CPNE1-203ENST00000397442 EXOC1LA0A1B0GW35 172 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 CCDC78A2IDD5 438 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 HEATR9A2RTY3 570 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 LDB2O43679 373 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 RECQLP46063 649 aaPredicted RBP27.66■■■□□ 2.02
CPNE1-203ENST00000397442 SEPT6Q14141 434 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 FRG1Q14331 258 aaKnown RBP27.66■■■□□ 2.02
CPNE1-203ENST00000397442 HNRNPA1L2Q32P51 320 aaKnown RBP27.66■■■□□ 2.02
CPNE1-203ENST00000397442 KRT71Q3SY84 523 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 IER5LQ5T953 404 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 EMC10Q5UCC4 262 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 SUGP1Q8IWZ8 645 aaKnown RBP27.66■■■□□ 2.02
CPNE1-203ENST00000397442 BLOC1S5Q8TDH9 187 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 CYTH2Q99418 400 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 HEPHQ9BQS7 1158 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 CCDC77Q9BR77 488 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 SUV39H2Q9H5I1 410 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 PRDM6Q9NQX0 595 aa27.66■■■□□ 2.02
CPNE1-203ENST00000397442 RASGRF2O14827 1237 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 NARSO43776 548 aaKnown RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 HLA-EP13747 358 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 SLCO1A2P46721 670 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 RPL26P61254 145 aaKnown RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 RAD51Q06609 339 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 GRM3Q14832 879 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 PTPRRQ15256 657 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 EGFLAMQ63HQ2 1017 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 SERBP1Q8NC51 408 aaKnown RBP eCLIP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 BRSK1Q8TDC3 778 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 ZNF641Q96N77 438 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 ACOX2Q99424 681 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 EURLQ9NYK6 297 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 SLC2A6Q9UGQ3 507 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 RPL26L1Q9UNX3 145 aaKnown RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 PIAS3Q9Y6X2 628 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 F5P12259 2224 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 FAM159BA6NKW6 160 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 CXorf49A8MYA2 514 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 H3BQF6 201 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 K7EQS6 105 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 OPA1O60313 960 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 CTSLP07711 333 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 CHRM1P11229 460 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 IL12RB1P42701 662 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 GRIA4P48058 902 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 PUS10Q3MIT2 529 aaKnown RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 ESRP1Q6NXG1 681 aaKnown RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 NUDT18Q6ZVK8 323 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 RALGPS2Q86X27 583 aaPredicted RBP27.65■■■□□ 2.02
CPNE1-203ENST00000397442 SPOCK2Q92563 424 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 ARL8AQ96BM9 186 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 TMBIM4Q9HC24 238 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 ZDHHC4Q9NPG8 344 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 IL1RAPL1Q9NZN1 696 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 FETUBQ9UGM5 382 aa27.65■■■□□ 2.02
CPNE1-203ENST00000397442 SMIM23A6NLE4 172 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 LOC730098B7Z3J9 87 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 UGT2B4P06133 528 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 TNFRSF4P43489 277 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 KLHL38Q2WGJ6 581 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 C9orf64Q5T6V5 341 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 TSTD2Q5T7W7 516 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 MDGA1Q8NFP4 955 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 GRIN3AQ8TCU5 1115 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 CERS2Q96G23 380 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 DHRS4Q9BTZ2 278 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.64■■■□□ 2.022e-16■■■■□ 24.6
CPNE1-203ENST00000397442 VPS18Q9P253 973 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 KCTD3Q9Y597 815 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 ARL5AQ9Y689 179 aa27.64■■■□□ 2.02
CPNE1-203ENST00000397442 EDDM13A0A1B0GTR0 161 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 TLDC2A0PJX2 215 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 AURKAO14965 403 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 IVLP07476 585 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 MYZAPP0CAP1 466 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 HNRNPLP14866 589 aaKnown RBP eCLIP27.63■■■□□ 2.012e-8■□□□□ 10.1
CPNE1-203ENST00000397442 ENPP2Q13822 863 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 SERPINA13PQ6UXR4 307 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 GDPD4Q6W3E5 623 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 C8orf33Q9H7E9 229 aaPredicted RBP27.63■■■□□ 2.01
CPNE1-203ENST00000397442 CTNNAL1Q9UBT7 734 aa27.63■■■□□ 2.01
CPNE1-203ENST00000397442 POC1B-GALNT4F8VUJ3 575 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 LEFTY1O75610 366 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 PAPSS2O95340 614 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-203ENST00000397442 ARNTP27540 789 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 KIR2DL1P43626 348 aaPredicted RBP27.62■■■□□ 2.01
CPNE1-203ENST00000397442 EPHB1P54762 984 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 CNGA3Q16281 694 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 OR13J1Q8NGT2 312 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 MED4Q9NPJ6 270 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 IL36AQ9UHA7 158 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 FAM50BQ9Y247 325 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 A0A0J9YYE9 177 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 SHISA7A6NL88 538 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 SIN3BO75182 1162 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 TRBC1P01850 177 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 ABL2P42684 1182 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms