RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 VPS36Q86VN1 386 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 NLRP14Q86W24 1093 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 RBFAQ8N0V3 343 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 FBXO39Q8N4B4 442 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 MLKLQ8NB16 471 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 CXorf40AQ8TE69 158 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 CFAP57Q96MR6 1250 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 CCDC3Q9BQI4 270 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 LRRC61Q9BV99 259 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 TTYH3Q9C0H2 523 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 STRADBQ9C0K7 418 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM248Q9NWD8 314 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 DKK3Q9UBP4 350 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 GULP1Q9UBP9 304 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 AJAP1Q9UKB5 411 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ACSL6Q9UKU0 697 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ATXN7L1Q9ULK2 861 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-208ENST00000397204 DOLKQ9UPQ8 538 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 ACTL7AQ9Y615 435 aa8.86□□□□□ -0.99
CAPN3-208ENST00000397204 UBR5O95071 2799 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 RAMP2O60895 175 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 GADD45BO75293 160 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ITGB2P05107 769 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 PNMA6AP0CW24 399 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 CTSEP14091 401 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 HTR1BP28222 390 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 SLC5A2P31639 672 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 IGFALSP35858 605 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 HK3P52790 923 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ATP11AP98196 1134 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 LRRC14Q15048 493 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 TPD52L1Q16890 204 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 KLHL40Q2TBA0 621 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ZSCAN23Q3MJ62 389 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM52BQ4KMG9 183 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 VWA3BQ502W6 1294 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 KLHDC7AQ5VTJ3 777 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 TRNP1Q6NT89 227 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 USP53Q70EK8 1073 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 RAB11FIP2Q7L804 512 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 STRADAQ7RTN6 431 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ZNF677Q86XU0 584 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 FAM114A1Q8IWE2 563 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ARL10Q8N8L6 244 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 OR6K2Q8NGY2 324 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ATL2Q8NHH9 583 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 CPA5Q8WXQ8 436 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 GFM1Q96RP9 751 aaKnown RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 NAA15Q9BXJ9 866 aaKnown RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 CPEB1Q9BZB8 566 aaKnown RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 MBNL1Q9NR56 388 aaKnown RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 NDFIP2Q9NV92 336 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 DNAI1Q9UI46 699 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 GGT7Q9UJ14 662 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 PNMA8BQ9ULN7 279 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-208ENST00000397204 ITM2BQ9Y287 266 aa8.85□□□□□ -0.99
CAPN3-208ENST00000397204 LRRK2Q5S007 2527 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 PMS2P1A4D2B8 440 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 FAM72CH0Y354 149 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 NVLO15381 856 aaKnown RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 BUB1O43683 1085 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 SLC28A2O43868 658 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 NOBOXO60393 691 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 LRIG2O94898 1065 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 RASGRP1O95267 797 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 PLEKP08567 350 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 SFTPCP11686 197 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 UCHL3P15374 230 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 MMP8P22894 467 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 SDC4P31431 198 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CCKBRP32239 447 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 UGT1A5P35504 534 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 PTPN9P43378 593 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CSRP3P50461 194 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 PDX1P52945 283 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 YBEYP58557 167 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 NOMO3P69849 1222 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CCL7P80098 99 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 ELP6Q0PNE2 266 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 RAPGEF1Q13905 1077 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CCDC14Q49A88 953 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 C2CD6Q53TS8 623 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 ATXN7L2Q5T6C5 722 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 FAM72AQ5TYM5 149 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TAF3Q5VWG9 929 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 FAM72DQ6L9T8 149 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 OGFOD3Q6PK18 319 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 FAM72BQ86X60 149 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 GKN2Q86XP6 184 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 HID1Q8IV36 788 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 EXD3Q8N9H8 876 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TP53I13Q8NBR0 393 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 RNF217Q8TC41 542 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 RXFP2Q8WXD0 754 aa8.84□□□□□ -0.99
CAPN3-208ENST00000397204 CENPIQ92674 756 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TSACCQ96A04 125 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-208ENST00000397204 TMEM159Q96B96 161 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms