RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 HEATR9A2RTY3 570 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TRIM64A6NGJ6 449 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 UBDO15205 165 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 ACOX3O15254 700 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 AKAP10O43572 662 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 COL6A2P12110 1019 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 GPX3P22352 226 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 PCID2Q5JVF3 399 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 PM20D1Q6GTS8 502 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 DHRS4L2Q6PKH6 230 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 LYSMD3Q7Z3D4 306 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TRIM74Q86UV6 250 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TRIM73Q86UV7 250 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 CBR4Q8N4T8 237 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 C3orf58Q8NDZ4 430 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 ABTB1Q969K4 478 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 ISOC1Q96CN7 298 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 FICDQ9BVA6 458 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 IL1RL2Q9HB29 575 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 POLR3BQ9NW08 1133 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 EGFL7Q9UHF1 273 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 COL4A4P53420 1690 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 TTC24A2A3L6 582 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 MAFKO60675 156 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 PFDN1O60925 122 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 SMPD1P17405 629 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 WARSP23381 471 aaKnown RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 PYCR3Q53H96 274 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 CHST15Q7LFX5 561 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 PIM3Q86V86 326 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 SLC52A3Q9NQ40 469 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 MYRFQ9Y2G1 1151 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 WISP3O95389 354 aaPredicted RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 CYP2C9P11712 490 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 CAPN3P20807 821 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TAF6P49848 677 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TIAL1Q01085 375 aaKnown RBP eCLIP14.01□□□□□ -0.17
NUP98-204ENST00000397004 RAB41Q5JT25 222 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 PIWIL4Q7Z3Z4 852 aaKnown RBP14.01□□□□□ -0.17
NUP98-204ENST00000397004 SIX6OS1Q8N1H7 587 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 ANKFN1Q8N957 763 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 FNDC8Q8TC99 324 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 FBXL20Q96IG2 436 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 MRGPRX2Q96LB1 330 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 USP22Q9UPT9 525 aa14.01□□□□□ -0.17
NUP98-204ENST00000397004 MRASO14807 208 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CCDC166P0CW27 439 aa14□□□□□ -0.17
NUP98-204ENST00000397004 BMP2P12643 396 aa14□□□□□ -0.17
NUP98-204ENST00000397004 ATP5F1P24539 256 aaPredicted RBP14□□□□□ -0.17
NUP98-204ENST00000397004 CDKN2DP55273 166 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CDH13P55290 713 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CAPRIN1Q14444 709 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 ZNF792Q3KQV3 632 aa14□□□□□ -0.17
NUP98-204ENST00000397004 ZBTB49Q6ZSB9 765 aa14□□□□□ -0.17
NUP98-204ENST00000397004 SPPL2CQ8IUH8 684 aa14□□□□□ -0.17
NUP98-204ENST00000397004 SREK1Q8WXA9 508 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 C12orf43Q96C57 262 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 RMND5BQ96G75 393 aaPredicted RBP14□□□□□ -0.17
NUP98-204ENST00000397004 UBXN10Q96LJ8 280 aa14□□□□□ -0.17
NUP98-204ENST00000397004 DCUN1D5Q9BTE7 237 aa14□□□□□ -0.17
NUP98-204ENST00000397004 DFFAO00273 331 aa14□□□□□ -0.17
NUP98-204ENST00000397004 NRP2O60462 931 aa14□□□□□ -0.17
NUP98-204ENST00000397004 HLA-DQB2P05538 268 aa14□□□□□ -0.17
NUP98-204ENST00000397004 SNRPB2P08579 225 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 POLR2IP36954 125 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 HADHAP40939 763 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CXCR3P49682 368 aa14□□□□□ -0.17
NUP98-204ENST00000397004 SH3BP2P78314 561 aa14□□□□□ -0.17
NUP98-204ENST00000397004 TAC4Q86UU9 113 aa14□□□□□ -0.17
NUP98-204ENST00000397004 GPR180Q86V85 440 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CMTR2Q8IYT2 770 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 PGAP3Q96FM1 320 aaPredicted RBP14□□□□□ -0.17
NUP98-204ENST00000397004 PNPLA3Q9NST1 481 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CIDEBQ9UHD4 219 aa14□□□□□ -0.17
NUP98-204ENST00000397004 FBXO5Q9UKT4 447 aa14□□□□□ -0.17
NUP98-204ENST00000397004 TCAF1Q9Y4C2 921 aa14□□□□□ -0.17
NUP98-204ENST00000397004 ZFC3H1O60293 1989 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 PMPCBO75439 489 aa14□□□□□ -0.17
NUP98-204ENST00000397004 IPO13O94829 963 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
NUP98-204ENST00000397004 DARSP14868 501 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 LRPAP1P30533 357 aa14□□□□□ -0.17
NUP98-204ENST00000397004 COG7P83436 770 aa14□□□□□ -0.17
NUP98-204ENST00000397004 TRAP1Q12931 704 aaKnown RBP14□□□□□ -0.17
NUP98-204ENST00000397004 PMS2P3Q13401 168 aa14□□□□□ -0.17
NUP98-204ENST00000397004 TMED1Q13445 227 aa14□□□□□ -0.17
NUP98-204ENST00000397004 GRB7Q14451 532 aa14□□□□□ -0.17
NUP98-204ENST00000397004 NAPEPLDQ6IQ20 393 aa14□□□□□ -0.17
NUP98-204ENST00000397004 PHYKPLQ8IUZ5 450 aa14□□□□□ -0.17
NUP98-204ENST00000397004 BBS5Q8N3I7 341 aa14□□□□□ -0.17
NUP98-204ENST00000397004 PTERQ96BW5 349 aa14□□□□□ -0.17
NUP98-204ENST00000397004 PAAF1Q9BRP4 392 aa14□□□□□ -0.17
NUP98-204ENST00000397004 TUBB1Q9H4B7 451 aa14□□□□□ -0.17
NUP98-204ENST00000397004 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14□□□□□ -0.17
NUP98-204ENST00000397004 COL1A2P08123 1366 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 TRPC5OSA6NMA1 111 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 NCAM2O15394 837 aa13.99□□□□□ -0.17
NUP98-204ENST00000397004 TPST1O60507 370 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms