RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 CNPY3Q9BT09 278 aa16.46■□□□□ 0.23
CLTA-203ENST00000396603 FZD10Q9ULW2 581 aa16.46■□□□□ 0.23
CLTA-203ENST00000396603 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.22
CLTA-203ENST00000396603 HELZ2Q9BYK8 2649 aaKnown RBP16.46■□□□□ 0.22
CLTA-203ENST00000396603 CCDC187A0A096LP49 1063 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 RASA4BC9J798 803 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 NTN3O00634 580 aaPredicted RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 YY2O15391 372 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 RASA4O43374 803 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 ITGA2BP08514 1039 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 TSHRP16473 764 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 XPAP23025 273 aaPredicted RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 CSNK1DP48730 415 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 HK3P52790 923 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 NDST2P52849 883 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 ZBED6P86452 979 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 SPIDRQ14159 915 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 UGP2Q16851 508 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 C3orf38Q5JPI3 329 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 ERAP2Q6P179 960 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 DNAJC24Q6P3W2 148 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 ZNF605Q86T29 641 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 SYN2Q92777 582 aaPredicted RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 HMCESQ96FZ2 354 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 ATXN7L3BQ96GX2 97 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 PRR11Q96HE9 360 aaPredicted RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 PCDHB18PQ96TA0 734 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 NCAPGQ9BPX3 1015 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 CCDC3Q9BQI4 270 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 CLPBQ9H078 707 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 SUV39H2Q9H5I1 410 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 LHX3Q9UBR4 397 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 PADI4Q9UM07 663 aa16.45■□□□□ 0.22
CLTA-203ENST00000396603 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 BZW2Q9Y6E2 419 aaKnown RBP16.45■□□□□ 0.22
CLTA-203ENST00000396603 SHROOM3Q8TF72 1996 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 LRRC53A6NM62 1247 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 MUSKO15146 869 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 KLK10O43240 276 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 CCP110O43303 1012 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 RASGRP1O95267 797 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 PRB1P04280 392 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 MTM1Q13496 603 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 NFATC4Q14934 902 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 IRF4Q15306 451 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
CLTA-203ENST00000396603 PERM1Q5SV97 790 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 PPP1R15BQ5SWA1 713 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 GKN2Q86XP6 184 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 TCEAL2Q9H3H9 227 aaPredicted RBP16.44■□□□□ 0.22
CLTA-203ENST00000396603 LRRC19Q9H756 370 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 CAAP1Q9H8G2 361 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 PDFQ9HBH1 243 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 MBNL1Q9NR56 388 aaKnown RBP16.44■□□□□ 0.22
CLTA-203ENST00000396603 UBA2Q9UBT2 640 aaPredicted RBP16.44■□□□□ 0.22
CLTA-203ENST00000396603 ACSL6Q9UKU0 697 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 PNMA8BQ9ULN7 279 aaPredicted RBP16.44■□□□□ 0.22
CLTA-203ENST00000396603 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 DOLKQ9UPQ8 538 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 PCDHGA7Q9Y5G6 932 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 DGKBQ9Y6T7 804 aa16.44■□□□□ 0.22
CLTA-203ENST00000396603 A0A1W2PNU3 283 aaPredicted RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 K7ENP7 123 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 HOXC4P09017 264 aaPredicted RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 C6P13671 934 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 CTSEP14091 401 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 PNLIPP16233 465 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 MMP12P39900 470 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 ZNF135P52742 658 aaPredicted RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 PDX1P52945 283 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 CYTH1Q15438 398 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 CFAP58Q5T655 872 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 INO80CQ6PI98 192 aaPredicted RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 LEKR1Q6ZMV7 388 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 SPOCK2Q92563 424 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 NAF1Q96HR8 494 aaKnown RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 WRAP53Q9BUR4 548 aaKnown RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 MAGEB5Q9BZ81 275 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 RBSNQ9H1K0 784 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 SEPT11Q9NVA2 429 aaKnown RBP16.43■□□□□ 0.22
CLTA-203ENST00000396603 CFAP46Q8IYW2 2715 aa16.43■□□□□ 0.22
CLTA-203ENST00000396603 TDRD6O60522 2096 aaKnown RBP16.42■□□□□ 0.22
CLTA-203ENST00000396603 MGAQ8IWI9 3026 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 FAM170AA1A519 330 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 CREB3O43889 395 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 PRAMEF11O60813 436 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 GJB6O95452 261 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 PLA2G2AP14555 144 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 KELP23276 732 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 CCKBRP32239 447 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 PRKCIP41743 596 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 NSUN2Q08J23 767 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLTA-203ENST00000396603 KLHL30Q0D2K2 578 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 C1orf61Q13536 156 aa16.42■□□□□ 0.22
CLTA-203ENST00000396603 RFTN1Q14699 578 aaPredicted RBP16.42■□□□□ 0.22
CLTA-203ENST00000396603 ALG11Q2TAA5 492 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms