RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TTC24A2A3L6 582 aaPredicted RBP16.23■□□□□ 0.19
SNX6-202ENST00000396526 C1RP00736 705 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 HDCP19113 662 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 SLC26A3P40879 764 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 RPL14P50914 215 aaKnown RBP16.23■□□□□ 0.19
SNX6-202ENST00000396526 ACAD11Q709F0 780 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 PIWIL4Q7Z3Z4 852 aaKnown RBP16.23■□□□□ 0.19
SNX6-202ENST00000396526 TMC7Q7Z402 723 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 OR13J1Q8NGT2 312 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 USP13Q92995 863 aaPredicted RBP16.23■□□□□ 0.19
SNX6-202ENST00000396526 CMTM5Q96DZ9 223 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 TBATAQ96M53 351 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 EBF4Q9BQW3 602 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 VPS9D1Q9Y2B5 631 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 TBC1D30Q9Y2I9 924 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 INSL5Q9Y5Q6 135 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 CENPFP49454 3210 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 GMPRP36959 345 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 KDSRQ06136 332 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 GALNT3Q14435 633 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 HECTD2Q5U5R9 776 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 SEL1L3Q68CR1 1132 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 TMEM199Q8N511 208 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 OR6Y1Q8NGX8 325 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 MYEOVQ96EZ4 313 aa16.23■□□□□ 0.19
SNX6-202ENST00000396526 F8W8V4 182 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CD3EAPO15446 510 aaKnown RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 GSC2O15499 205 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 LDB2O43679 373 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CIB2O75838 187 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 KLKB1P03952 638 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 ALOX15P16050 662 aaPredicted RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 PGM1P36871 562 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 IDH3AP50213 366 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 C16orf59Q7L2K0 433 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 RNF135Q8IUD6 432 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CEP97Q8IW35 865 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CENPLQ8N0S6 344 aaPredicted RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 ELMOD1Q8N336 334 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CARNMT1Q8N4J0 409 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 ZNF689Q96CS4 500 aaPredicted RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 GCNAQ96QF7 691 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 EML4Q9HC35 981 aaKnown RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 TAS2R1Q9NYW7 299 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 HDAC3O15379 428 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 OGNP20774 298 aaKnown RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 NSUN2Q08J23 767 aaKnown RBP eCLIP16.22■□□□□ 0.19
SNX6-202ENST00000396526 SLC22A9Q8IVM8 553 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 FAM13CQ8NE31 585 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 OR4L1Q8NH43 312 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 NDNQ99608 321 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 RNF38Q9H0F5 515 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 CATSPERZQ9NTU4 200 aa16.22■□□□□ 0.19
SNX6-202ENST00000396526 NOP53Q9NZM5 478 aaKnown RBP16.22■□□□□ 0.19
SNX6-202ENST00000396526 PIGNO95427 931 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 LRG1P02750 347 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 AOC1P19801 751 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 CDH18Q13634 790 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 COG4Q9H9E3 785 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 CD248Q9HCU0 757 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 VPS28Q9UK41 221 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 GOLGA8QA0A0J9YX86 632 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 GOLGA8OA6NCC3 632 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 C2orf78A6NCI8 922 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.21■□□□□ 0.19
SNX6-202ENST00000396526 GOLGA8NF8WBI6 632 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 TBL1XO60907 577 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 CCDC166P0CW27 439 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 CSRP3P50461 194 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 ACAP2Q15057 778 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 ICE2Q659A1 982 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 ZNF781Q8N8C0 355 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 TTC16Q8NEE8 873 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 HEXDCQ8WVB3 486 aa16.21■□□□□ 0.19
SNX6-202ENST00000396526 DNAJC1Q96KC8 554 aaKnown RBP16.21■□□□□ 0.19
SNX6-202ENST00000396526 FNDC1Q4ZHG4 1894 aaPredicted RBP16.21■□□□□ 0.19
SNX6-202ENST00000396526 NYNRINQ9P2P1 1898 aaKnown RBP16.21■□□□□ 0.19
SNX6-202ENST00000396526 CAPN14A8MX76 684 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 MUSKO15146 869 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 NPHS1O60500 1241 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 NUMBP49757 651 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 EPHB1P54762 984 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 ACVR1Q04771 509 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 ZNF460Q14592 562 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 GLT6D1Q7Z4J2 308 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 GPR150Q8NGU9 434 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 STMN2Q93045 179 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 FAR2Q96K12 515 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 PRICKLE1Q96MT3 831 aaPredicted RBP16.21■□□□□ 0.18
SNX6-202ENST00000396526 CADM1Q9BY67 442 aaKnown RBP16.21■□□□□ 0.18
SNX6-202ENST00000396526 TCF7L2Q9NQB0 619 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 HACD3Q9P035 362 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 ZNF510Q9Y2H8 683 aa16.21■□□□□ 0.18
SNX6-202ENST00000396526 PRR5-ARHGAP8B1AHC4 643 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 H3BNC9 293 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 S1PR4O95977 384 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 TIMP1P01033 207 aa16.2■□□□□ 0.18
SNX6-202ENST00000396526 ARHGAP8P85298 464 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms