RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SYNDIG1Q9H7V2 258 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CCDC167Q9P0B6 97 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 AFF4Q9UHB7 1163 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 SLC9A8Q9Y2E8 581 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 DOCK5Q9H7D0 1870 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TRPC5OSA6NMA1 111 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 TM9SF1O15321 606 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CSF2P04141 144 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 RD3LP0DJH9 198 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CD247P20963 164 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZNF132P52740 706 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SRP54P61011 504 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 BNIP2Q12982 314 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZNF284Q2VY69 593 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 C5orf22Q49AR2 442 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 IL23RQ5VWK5 629 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 METTL2BQ6P1Q9 378 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 CCBE1Q6UXH8 406 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SPATC1Q76KD6 591 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SNX31Q8N9S9 440 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 SHCBP1Q8NEM2 672 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 LILRB1Q8NHL6 650 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 LRCH3Q96II8 777 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 METTL2AQ96IZ6 378 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 SLC2A11Q9BYW1 496 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 WDR11Q9BZH6 1224 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 CDH19Q9H159 772 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 WDR55Q9H6Y2 383 aaPredicted RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZC3H7BQ9UGR2 993 aaKnown RBP8.48□□□□□ -1.05
NDE1-202ENST00000396355 CYB5R1Q9UHQ9 305 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 STON1Q9Y6Q2 735 aa8.48□□□□□ -1.05
NDE1-202ENST00000396355 ZNF536O15090 1300 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 MAGEB16A2A368 324 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 METTL21EPA6NDL7 271 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 DHX15O43143 795 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 JRKO75564 520 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PRKCAP17252 672 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 TNNI1P19237 187 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ATP6V1B2P21281 511 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FASP25445 335 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 SLC1A6P48664 564 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ALDH6A1Q02252 535 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 PMS2P3Q13401 168 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ZNF544Q6NX49 715 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PGM2L1Q6PCE3 622 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 DCP2Q8IU60 420 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 CHPT1Q8WUD6 406 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 TRUB1Q8WWH5 349 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 BIRC8Q96P09 236 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PCDHB18PQ96TA0 734 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.47□□□□□ -1.05
NDE1-202ENST00000396355 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 LOC110117498-PIK3R3F6TDL0 507 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 AXIN1O15169 862 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 XYLBO75191 536 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FAM155BO75949 473 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 NCAM1P13591 858 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PSMA4P25789 261 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 OR3A3P47888 321 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 DEFA5Q01523 94 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 IL18R1Q13478 541 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PITRM1Q5JRX3 1037 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FNBP1LQ5T0N5 605 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ALKBH2Q6NS38 261 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 SNX20Q7Z614 316 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 RAB43Q86YS6 212 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 CAMK1DQ8IU85 385 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 MARVELD2Q8N4S9 558 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 HERVK_113Q902F9 699 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FAM84AQ96KN4 292 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 LENG8Q96PV6 779 aaPredicted RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 TM9SF2Q99805 663 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 UCK2Q9BZX2 261 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 GPRC5CQ9NQ84 441 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 TCF7L2Q9NQB0 619 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 DDX43Q9NXZ2 648 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 NCKIPSDQ9NZQ3 722 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ZNF222Q9UK12 451 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 AFG3L2Q9Y4W6 797 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 H3BMQ9 156 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ZNF37AP17032 561 aaPredicted RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 EPHA3P29320 983 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PTPN5P54829 565 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 CYP4F2P78329 520 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 TFAMQ00059 246 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 CYP4F3Q08477 520 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 NFATC3Q12968 1075 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 UGCGQ16739 394 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ADGRG6Q86SQ4 1221 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FAM109AQ8N4B1 249 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 ANKK1Q8NFD2 765 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 PIWIL2Q8TC59 973 aaKnown RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 SYTL5Q8TDW5 730 aaPredicted RBP8.47□□□□□ -1.05
NDE1-202ENST00000396355 AFG1LQ8WV93 481 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 FBXL20Q96IG2 436 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 COG8Q96MW5 612 aa8.47□□□□□ -1.05
NDE1-202ENST00000396355 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms