RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NCDNQ9UBB6 729 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 TPX2Q9ULW0 747 aaKnown RBP19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PHTF1Q9UMS5 762 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 CHKBQ9Y259 395 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 PCDHGA5Q9Y5G8 931 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 WDR87Q6ZQQ6 2873 aa19.33■□□□□ 0.68
HOXA9-202ENST00000396345 F5H423 210 aaPredicted RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 ZNF185O15231 689 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 OPHN1O60890 802 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 MT-CYBP00156 380 aaPredicted RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 PDHA1P08559 390 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 MAT2AP31153 395 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 STIP1P31948 543 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 DPP6P42658 865 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 ETF1P62495 437 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 RPS21P63220 83 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 FAM193AP78312 1265 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 KIAA1161Q6NSJ0 714 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 DRICH1Q6PGQ1 229 aaPredicted RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 SYT12Q8IV01 421 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 NDUFAF2Q8N183 169 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 CCDC110Q8TBZ0 833 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 PIH1D2Q8WWB5 315 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 DNASE2BQ8WZ79 361 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 TADA1Q96BN2 335 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 MIR1-1HGQ9H1L0 117 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 GBA3Q9H227 469 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 UBP1Q9NZI7 540 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 FAM153AQ9UHL3 310 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 EIF2B4Q9UI10 523 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 PILRBQ9UKJ0 227 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 ZFR2Q9UPR6 939 aaKnown RBP19.32■□□□□ 0.68
HOXA9-202ENST00000396345 SAR1BQ9Y6B6 198 aa19.32■□□□□ 0.68
HOXA9-202ENST00000396345 ATXN2Q99700 1313 aaKnown RBP19.31■□□□□ 0.68
HOXA9-202ENST00000396345 LATO43561 262 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 PMPCBO75439 489 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 GCATO75600 419 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 PRLP01236 227 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 ITGAVP06756 1048 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 NFKBIAP25963 317 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 CD27P26842 260 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 CASQ1P31415 396 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 MMP12P39900 470 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 EPHB1P54762 984 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 GDF10P55107 478 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 PCSK7Q16549 785 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 TMEM52BQ4KMG9 183 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 SEL1L3Q68CR1 1132 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 ARHGEF18Q6ZSZ5 1173 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 ASCL5Q7RTU5 278 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 PRELID2Q8N945 189 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 CXorf40AQ8TE69 158 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 VPS45Q9NRW7 570 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 TMEM74BQ9NUR3 256 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 SMARCAL1Q9NZC9 954 aa19.31■□□□□ 0.68
HOXA9-202ENST00000396345 DRG1Q9Y295 367 aaKnown RBP19.31■□□□□ 0.68
HOXA9-202ENST00000396345 TRPM6Q9BX84 2022 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 OTOGLQ3ZCN5 2332 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 A0A1W2PPC4 97 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 IGLON5A6NGN9 336 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 FANCGO15287 622 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 MMP20O60882 483 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 NUDT1P36639 197 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 MPLP40238 635 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 RPL26P61254 145 aaKnown RBP19.3■□□□□ 0.68
HOXA9-202ENST00000396345 SEMG2Q02383 582 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 CDK18Q07002 472 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 PRPSAP1Q14558 356 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 ZNF284Q2VY69 593 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 TMEM259Q4ZIN3 620 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 SETMARQ53H47 684 aaPredicted RBP19.3■□□□□ 0.68
HOXA9-202ENST00000396345 SYT10Q6XYQ8 523 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 DPPA4Q7L190 304 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 KDELC2Q7Z4H8 507 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 ZSCAN30Q86W11 494 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 LPCAT1Q8NF37 534 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 RUBCNQ92622 972 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 KLK6Q92876 244 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 RTP4Q96DX8 246 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 IFT43Q96FT9 208 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 OXNAD1Q96HP4 312 aaPredicted RBP19.3■□□□□ 0.68
HOXA9-202ENST00000396345 HINFPQ9BQA5 517 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 WRAP53Q9BUR4 548 aaKnown RBP19.3■□□□□ 0.68
HOXA9-202ENST00000396345 AP1M1Q9BXS5 423 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 ADGRE3Q9BY15 652 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 EBF2Q9HAK2 575 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 RPL26L1Q9UNX3 145 aaKnown RBP19.3■□□□□ 0.68
HOXA9-202ENST00000396345 PPIL1Q9Y3C6 166 aa19.3■□□□□ 0.68
HOXA9-202ENST00000396345 ANXA9O76027 345 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 IFNB1P01574 187 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 CYP2A6P11509 494 aaPredicted RBP19.29■□□□□ 0.68
HOXA9-202ENST00000396345 GNSP15586 552 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 CTPS1P17812 591 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 PSMB4P28070 264 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 HOXD12P35452 270 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 GEMP55040 296 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 WNT3AP56704 352 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 MPP3Q13368 585 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 P3H1Q32P28 736 aa19.29■□□□□ 0.68
HOXA9-202ENST00000396345 KDELC1Q6UW63 502 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms