RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 SERPING1P05155 500 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 GP1BAP07359 652 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 LIG3P49916 1009 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 DAB2P98082 770 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 ELP6Q0PNE2 266 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 C1orf61Q13536 156 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 IHHQ14623 411 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 RFTN1Q14699 578 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-206ENST00000395795 GRM3Q14832 879 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 ZCCHC8Q6NZY4 707 aaKnown RBP16.29■□□□□ 0.2
CXCL12-206ENST00000395795 GUSBP11Q6P575 273 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 CBARPQ8N350 705 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-206ENST00000395795 PLA2G15Q8NCC3 412 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 LMX1AQ8TE12 382 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
CXCL12-206ENST00000395795 DUSP23Q9BVJ7 150 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 PCDH18Q9HCL0 1135 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 MRPL47Q9HD33 250 aaKnown RBP16.29■□□□□ 0.2
CXCL12-206ENST00000395795 DONSONQ9NYP3 566 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 ITPR1Q14643 2758 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 ANKRD36A6QL64 1941 aa16.29■□□□□ 0.2
CXCL12-206ENST00000395795 RP1P56715 2156 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 NEMP2A6NFY4 417 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 TOR1BO14657 336 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 HTRA2O43464 458 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 CD48P09326 243 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 TGM2P21980 687 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 HNRNPH3P31942 346 aaKnown RBP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 LRRC14Q15048 493 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 ALG11Q2TAA5 492 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 PERM1Q5SV97 790 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 SLC35F3Q8IY50 421 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 LZTR1Q8N653 840 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 CPLX3Q8WVH0 158 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 TEKT4Q8WW24 435 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 NXPE2Q96DL1 559 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 NCAPGQ9BPX3 1015 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 ZWILCHQ9H900 591 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 SP110Q9HB58 689 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 USP29Q9HBJ7 922 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 IFNKQ9P0W0 207 aa16.28■□□□□ 0.2
CXCL12-206ENST00000395795 BZW2Q9Y6E2 419 aaKnown RBP16.28■□□□□ 0.2
CXCL12-206ENST00000395795 EME2A4GXA9 379 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-206ENST00000395795 CFAP69A5D8W1 941 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 LMO7DNF2Z398 122 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 H3BM21 787 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 H3BRJ5 948 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 YY2O15391 372 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 DAPK3O43293 454 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 TSHRP16473 764 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 DESP17661 470 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 ITPKBP27987 946 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 PEX5P50542 639 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 MMRN1Q13201 1228 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 PIGHQ14442 188 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-206ENST00000395795 INPP5AQ14642 412 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.2
CXCL12-206ENST00000395795 PTPRRQ15256 657 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 CDKN3Q16667 212 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 ATP13A4Q4VNC1 1196 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 PRRT3Q5FWE3 981 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 TMCO4Q5TGY1 634 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 DPPA4Q7L190 304 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 PDZD3Q86UT5 571 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 IFI44Q8TCB0 444 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 HSPH1Q92598 858 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 ZNF599Q96NL3 588 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 MGME1Q9BQP7 344 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 APOOQ9BUR5 198 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 NUP85Q9BW27 656 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 CINPQ9BW66 212 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-206ENST00000395795 ATP13A3Q9H7F0 1226 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 SPASTQ9UBP0 616 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 APOBEC3BQ9UH17 382 aaKnown RBP16.27■□□□□ 0.2
CXCL12-206ENST00000395795 OR1A2Q9Y585 309 aa16.27■□□□□ 0.2
CXCL12-206ENST00000395795 BRINP1O60477 761 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 RECQL5O94762 991 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 ALPPL2P10696 532 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 SERPINA4P29622 427 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 CASP14P31944 242 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 EIF2S3P41091 472 aaKnown RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 SCNN1BP51168 640 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 HK3P52790 923 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 THOP1P52888 689 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 PDX1P52945 283 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 ADKP55263 362 aaKnown RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 AP1S1P61966 158 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 PTK2BQ14289 1009 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 NFATC4Q14934 902 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 C6orf132Q5T0Z8 1188 aa16.26■□□□□ 0.19
CXCL12-206ENST00000395795 ALKBH5Q6P6C2 394 aaKnown RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 SNIP1Q8TAD8 396 aaKnown RBP16.26■□□□□ 0.19
CXCL12-206ENST00000395795 BTN2A2Q8WVV5 523 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms