RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 CES1P23141 567 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 RBL1P28749 1068 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 CD86P42081 329 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 EIF3EP60228 445 aaKnown RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 RPS21P63220 83 aaKnown RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 BNC1Q01954 994 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 KLF1Q13351 362 aaPredicted RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 XRCC4Q13426 336 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 PTPRRQ15256 657 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 TMEM52BQ4KMG9 183 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 SLC45A4Q5BKX6 768 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 RABEPKQ7Z6M1 372 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 PAF1Q8N7H5 531 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 HTR3CQ8WXA8 447 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 SERAC1Q96JX3 654 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 TEKT5Q96M29 485 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 C16orf45Q96MC5 204 aaPredicted RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 WRAP53Q9BUR4 548 aaKnown RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 SLC17A9Q9BYT1 436 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 FZD3Q9NPG1 666 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 R3HDM2Q9Y2K5 976 aaKnown RBP16.67■□□□□ 0.26
CXCL1-201ENST00000395761 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
CXCL1-201ENST00000395761 A0A1B0GVT2 93 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 CTAGE9A4FU28 777 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 A8MX80 341 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 PRR5-ARHGAP8B1AHC4 643 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 KCNK3O14649 394 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 ENC1O14682 589 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 FANCGO15287 622 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 FZD6O60353 706 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SOCS5O75159 536 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 PAK4O96013 591 aaPredicted RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 WNT1P04628 370 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 ATP1A1P05023 1023 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 CASQ1P31415 396 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 CD68P34810 354 aaPredicted RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SUOXP51687 545 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 AFF3P51826 1226 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 POLR2LP62875 67 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 RACK1P63244 317 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 FAM193AP78312 1265 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SKOR1P84550 965 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SETMARQ53H47 684 aaPredicted RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 ARMC12Q5T9G4 340 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 KIAA1161Q6NSJ0 714 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 PIH1D2Q8WWB5 315 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 SMIM14Q96QK8 99 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 MYOCQ99972 504 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 C1QTNF2Q9BXJ5 285 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 NUSAP1Q9BXS6 441 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 CARD9Q9H257 536 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 GLOD4Q9HC38 313 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 AASDHPPTQ9NRN7 309 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 HAUS2Q9NVX0 235 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 TPX2Q9ULW0 747 aaKnown RBP16.66■□□□□ 0.26
CXCL1-201ENST00000395761 DMTF1Q9Y222 760 aa16.66■□□□□ 0.26
CXCL1-201ENST00000395761 DOCK9Q9BZ29 2069 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 CES2O00748 559 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 RAD51BO15315 384 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 CPP00450 1065 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 PRLP01236 227 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 RBP3P10745 1247 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ENGP17813 658 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 MMP12P39900 470 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ELP6Q0PNE2 266 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 RALGDSQ12967 914 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 SEL1L2Q5TEA6 688 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ERAP2Q6P179 960 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 DARS2Q6PI48 645 aaKnown RBP16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
CXCL1-201ENST00000395761 SLC13A5Q86YT5 568 aaPredicted RBP16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ZNF567Q8N184 647 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 OR2I1PQ8NGU4 316 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 SPATA22Q8NHS9 363 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 CXorf40AQ8TE69 158 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 IMP4Q96G21 291 aaKnown RBP16.65■□□□□ 0.26
CXCL1-201ENST00000395761 PBKQ96KB5 322 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 RBM15Q96T37 977 aaKnown RBP eCLIP16.65■□□□□ 0.26
CXCL1-201ENST00000395761 SLC25A51Q9H1U9 297 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 PHTF1Q9UMS5 762 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 SNX12Q9UMY4 172 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 CHKBQ9Y259 395 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 PLXNA2O75051 1894 aa16.65■□□□□ 0.26
CXCL1-201ENST00000395761 ANKRD36A6QL64 1941 aa16.64■□□□□ 0.26
CXCL1-201ENST00000395761 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 A0A1W2PR77 199 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 F5H423 210 aaPredicted RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 PRAMEF26H0Y7S4 382 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 ARHGAP33O14559 1287 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 MTSS1O43312 755 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 CTPS1P17812 591 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 TCP1P17987 556 aaKnown RBP16.64■□□□□ 0.25
CXCL1-201ENST00000395761 CD38P28907 300 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 CXCR5P32302 372 aa16.64■□□□□ 0.25
CXCL1-201ENST00000395761 NUDT1P36639 197 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms