RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 MAVSQ7Z434 540 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PSD4Q8NDX1 1056 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 ZC3H15Q8WU90 426 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 HEXDCQ8WVB3 486 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PPM1MQ96MI6 270 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 SGIP1Q9BQI5 828 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 C17orf80Q9BSJ5 609 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 CXorf21Q9HAI6 301 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 DDX28Q9NUL7 540 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PTTG2Q9NZH5 202 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 FBXO5Q9UKT4 447 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PABPN1LA6NDY0 278 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 RRN3P2A6NIE6 340 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 CHEK2O96017 543 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 PABPC4LP0CB38 370 aaKnown RBP13.3□□□□□ -0.28
NFKB1-202ENST00000394820 CYP4B1P13584 511 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 MTTPP55157 894 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 DMPKQ09013 629 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 TAF12Q16514 161 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 TEX44Q53QW1 395 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 AGAP9Q5VTM2 703 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 ZFP1Q6P2D0 407 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 ARRDC4Q8NCT1 418 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 TMCO1Q9UM00 188 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 NDUFAF1Q9Y375 327 aa13.3□□□□□ -0.28
NFKB1-202ENST00000394820 DLX3O60479 287 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CD4P01730 458 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 GNAO1P09471 354 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ARRB2P32121 409 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 NR2C2P49116 596 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 PSEN2P49810 448 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SCNN1GP51170 649 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 LIMK2P53671 638 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 INCA1Q0VD86 236 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 POLD3Q15054 466 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 KYAT1Q16773 422 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF410Q86VK4 478 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF276Q8N554 614 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SPAG4Q9NPE6 437 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF646O15015 1829 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 MYBPHLA2RUH7 354 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 LRRC14BA6NHZ5 514 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 E5RI56 91 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 RHOBTB1O94844 696 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 MPOP05164 745 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 LILRA4P59901 499 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 RBM20Q5T481 1227 aaKnown RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 EGFLAMQ63HQ2 1017 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CYP4V2Q6ZWL3 525 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ADCK1Q86TW2 530 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CUZD1Q86UP6 607 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SNX29P2Q8IUI4 249 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 MICU2Q8IYU8 434 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 PTGR2Q8N8N7 351 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 KLHL32Q96NJ5 620 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CD274Q9NZQ7 290 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CNTN3Q9P232 1028 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SCN1AP35498 2009 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 DHRS12A0PJE2 317 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 AURKAO14965 403 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 AHSGP02765 367 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ZNF182P17025 639 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CPOXP36551 454 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 RAD23AP54725 363 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 ANKDD1AQ495B1 522 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SV2CQ496J9 727 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 GALNT18Q6P9A2 607 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 PARK7Q99497 189 aaKnown RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 SORT1Q99523 831 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 KCTD14Q9BQ13 255 aaPredicted RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 TRIM15Q9C019 465 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 NOL6Q9H6R4 1146 aaKnown RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 CLK4Q9HAZ1 481 aaKnown RBP13.29□□□□□ -0.28
NFKB1-202ENST00000394820 NDFIP2Q9NV92 336 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 OAZ3Q9UMX2 235 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 FADS3Q9Y5Q0 445 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 NUMA1Q14980 2115 aa13.29□□□□□ -0.28
NFKB1-202ENST00000394820 YJEFN3A6XGL0 299 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 EI24O14681 340 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 TNPO2O14787 897 aaKnown RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 B4GAT1O43505 415 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 CCNT2O60583 730 aaKnown RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 ESRRBO95718 433 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 PSMB9P28065 219 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
NFKB1-202ENST00000394820 NUP107P57740 925 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 MYBPC1Q00872 1141 aa13.28□□□□□ -0.28
NFKB1-202ENST00000394820 FAM187BQ17R55 369 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms