RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TSC22D2O75157 780 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CCNKO75909 580 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 LAG3P18627 525 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 TFE3P19532 575 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 SOX11P35716 441 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SCNN1AP37088 669 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RENBPP51606 427 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 BNIP3Q12983 259 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MPP2Q14168 576 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MAPRE2Q15555 327 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CTC1Q2NKJ3 1217 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 BRMS1LQ5PSV4 323 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 VARS2Q5ST30 1063 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 HECTD3Q5T447 861 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MARC1Q5VT66 337 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FOXB2Q5VYV0 432 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CCDC81Q6ZN84 652 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MYO1HQ8N1T3 1032 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 ATAD1Q8NBU5 361 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PSMA8Q8TAA3 256 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SLC35F5Q8WV83 523 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 STARD8Q92502 1023 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SEC14L1Q92503 715 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SUSD3Q96L08 255 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CINPQ9BW66 212 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 REXO4Q9GZR2 422 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 LRRC40Q9H9A6 602 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MOV10Q9HCE1 1003 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 TBC1D13Q9NVG8 400 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MAGEB16A2A368 324 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 KCNK1O00180 336 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 TRAFD1O14545 582 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 MDM4O15151 490 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FOXD2O60548 495 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 RAMP2O60895 175 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 OAS1P00973 400 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 FYNP06241 537 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 ATP5BP06576 529 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 RHOCP08134 193 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SERPINA6P08185 405 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CPA3P15088 417 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 ERCC2P18074 760 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 NR4A1P22736 598 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PTGS2P35354 604 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 NDUFV1P49821 464 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CDK9P50750 372 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 DAOAP59103 153 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PHC1P78364 1004 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 DUSP4Q13115 394 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CDH18Q13634 790 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PGS1Q32NB8 556 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 TMTC4Q5T4D3 741 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PPP2R2DQ66LE6 453 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 NEK5Q6P3R8 708 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 AGMOQ6ZNB7 445 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 DLG3Q92796 817 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RGS18Q9NS28 235 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 THAP1Q9NVV9 213 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PLK2Q9NYY3 685 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RCOR3Q9P2K3 495 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 CACNG4Q9UBN1 327 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 LGALS13Q9UHV8 139 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 VPS51Q9UID3 782 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 DNMT3LQ9UJW3 386 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 BAG5Q9UL15 447 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 VANGL2Q9ULK5 521 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PCDHGA3Q9Y5H0 932 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MYOCOSA0A1B0GUC4 107 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 E2F8A0AVK6 867 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CCDC78A2IDD5 438 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 TMEM221A6NGB7 291 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 ZSCAN5BA6NJL1 495 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 NRP1O14786 923 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 SNX2O60749 519 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 ABHD2P08910 425 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 MYCLP1P12525 358 aaPredicted RBP5.72□□□□□ -1.49
RFFL-202ENST00000394597 MYL4P12829 197 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 OR1E1P30953 314 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 ELK3P41970 407 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 IL12RB1P42701 662 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 BLVRAP53004 296 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CSE1LP55060 971 aaKnown RBP5.72□□□□□ -1.49
RFFL-202ENST00000394597 BMPR2Q13873 1038 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 RALGPS1Q5JS13 557 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CYP2R1Q6VVX0 501 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CCDC149Q6ZUS6 474 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 TFAP2DQ7Z6R9 452 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 SNX32Q86XE0 403 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 C12orf50Q8NA57 414 aaPredicted RBP5.72□□□□□ -1.49
RFFL-202ENST00000394597 ASIC4Q96FT7 647 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 DGCR6LQ9BY27 220 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CEP41Q9BYV8 373 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 WDR12Q9GZL7 423 aaKnown RBP5.72□□□□□ -1.49
RFFL-202ENST00000394597 C12orf4Q9NQ89 552 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 CDH22Q9UJ99 828 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 GNPTGQ9UJJ9 305 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 FAM32AQ9Y421 112 aaKnown RBP5.72□□□□□ -1.49
RFFL-202ENST00000394597 LTBP1Q14766 1721 aa5.72□□□□□ -1.49
RFFL-202ENST00000394597 A0A0A0MRY4 1105 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms