RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 SLC35B4Q969S0 331 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 DUS3LQ96G46 650 aaKnown RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MEAF6Q9HAF1 191 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MTF2Q9Y483 593 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 PHIPQ8WWQ0 1821 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 TRIM64CA6NLI5 447 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 CLDN5O00501 218 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 INPP4BO15327 924 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 MATN1P21941 496 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 NOS2P35228 1153 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 TMED10P49755 219 aaKnown RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 EIF2B2P49770 351 aaKnown RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 TNK2Q07912 1038 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 ZNF470Q6ECI4 717 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 HFE2Q6ZVN8 426 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 ZNF420Q8TAQ5 688 aaPredicted RBP16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 HDAC10Q969S8 669 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 C9orf16Q9BUW7 83 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 ATXN3LQ9H3M9 355 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 AGPAT4Q9NRZ5 378 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 SNTG2Q9NY99 539 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 PTGDR2Q9Y5Y4 395 aa16.51■□□□□ 0.23
EFEMP1-202ENST00000394555 CFAP99D6REC4 459 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 SNAP29O95721 258 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 SLC1A2P43004 574 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 CSRP3P50461 194 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 EN1Q05925 392 aaPredicted RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 NFATC3Q12968 1075 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 MOGQ16653 247 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 CYP51A1Q16850 503 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 INTS11Q5TA45 600 aaKnown RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 FAM45BPQ6NSW5 357 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 FUNDC1Q8IVP5 155 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 DDIASQ8IXT1 998 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 PCYOX1LQ8NBM8 494 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 CHST13Q8NET6 341 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 FAM45AQ8TCE6 357 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 ADAMTS16Q8TE57 1224 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 SEPT8Q92599 483 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 EXT2Q93063 718 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 ACDQ96AP0 544 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 EML4Q9HC35 981 aaKnown RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 TBC1D13Q9NVG8 400 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 NSMCE4AQ9NXX6 385 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 SUPT7LO94864 414 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 INHBBP09529 407 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 TGFB3P10600 412 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 NCAM1P13591 858 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 INSRRP14616 1297 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 CCNA2P20248 432 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 NR4A1P22736 598 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 BTG3Q14201 252 aaPredicted RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 UGP2Q16851 508 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 RGS21Q2M5E4 152 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 ZIK1Q3SY52 487 aaPredicted RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 CELF3Q5SZQ8 465 aaKnown RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 FBXO16Q8IX29 292 aaPredicted RBP16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 C3orf30Q96M34 536 aa16.5■□□□□ 0.23
EFEMP1-202ENST00000394555 A0A0J9YYE9 177 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 A8MT66 165 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 ONECUT3O60422 494 aaPredicted RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 APBA3O96018 575 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 NCK1P16333 377 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 POLR2IP36954 125 aaKnown RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 SEPT6Q14141 434 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 SMYD5Q6GMV2 418 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 DCLRE1AQ6PJP8 1040 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 PLPPR4Q7Z2D5 763 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 CENPNQ96H22 339 aaPredicted RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 FANCEQ9HB96 536 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 GID8Q9NWU2 228 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 TMEM247A6NEH6 219 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 HBP1O60381 514 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 BEST1O76090 585 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 IPO13O94829 963 aaKnown RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 BCL10O95999 233 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 TKTP29401 623 aaKnown RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 HOXD12P35452 270 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 ACADSBP45954 432 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 CDH13P55290 713 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 FRG1Q14331 258 aaKnown RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 OTUD3Q5T2D3 398 aaPredicted RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 PACRGLQ8N7B6 248 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 PIF1Q9H611 641 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 PKD2L2Q9NZM6 624 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 MAP10Q9P2G4 905 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 DSEQ9UL01 958 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 LCTP09848 1927 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 RLFQ13129 1914 aa16.49■□□□□ 0.23
EFEMP1-202ENST00000394555 ERI2A8K979 691 aaKnown RBP16.48■□□□□ 0.23
EFEMP1-202ENST00000394555 I6L893 689 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms