RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NAPEPLDQ6IQ20 393 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
USP44-202ENST00000393091 CPT1BQ92523 772 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 RAB17Q9H0T7 212 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
USP44-202ENST00000393091 SCNN1BP51168 640 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 WNT3AP56704 352 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 DCDC1P59894 354 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ACVR1Q04771 509 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 LAMB3Q13751 1172 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 QPCTQ16769 361 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 TMEM259Q4ZIN3 620 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 TMEM31Q5JXX7 168 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 RBM15Q96T37 977 aaKnown RBP eCLIP13.35□□□□□ -0.27
USP44-202ENST00000393091 TBL1YQ9BQ87 522 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 CDH19Q9H159 772 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ZDHHC6Q9H6R6 413 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 WSB2Q9NYS7 404 aaPredicted RBP13.35□□□□□ -0.27
USP44-202ENST00000393091 IGHV1OR15-9A0A0B4J2B8 117 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ANKRD66B4E2M5 251 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 E7ESA3 106 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 RAD51CO43502 376 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 DNTTP04053 509 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ACTN2P35609 894 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 TPMTP51580 245 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 C2orf54Q08AI8 447 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 UGP2Q16851 508 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 LEKR1Q6ZMV7 388 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 NRSN1Q8IZ57 195 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 NDUFAF2Q8N183 169 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 ART4Q93070 314 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 SNF8Q96H20 258 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 KRT12Q99456 494 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 TM6SF2Q9BZW4 377 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
USP44-202ENST00000393091 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 GRHL1Q9NZI5 618 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 BDP1A6H8Y1 2624 aa13.35□□□□□ -0.27
USP44-202ENST00000393091 EIF3HO15372 352 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP44-202ENST00000393091 GJB3O75712 270 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 NPY2RP49146 381 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MAXP61244 160 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 LRRN4Q8WUT4 740 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 KLHL32Q96NJ5 620 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 IRF2BPLQ9H1B7 796 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MTG2Q9H4K7 406 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 RAD18Q9NS91 495 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP44-202ENST00000393091 SEPT10Q9P0V9 454 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MROH6A6NGR9 719 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 RNGTTO60942 597 aaKnown RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 PIGNO95427 931 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 HOXC4P09017 264 aaPredicted RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 ETS1P14921 441 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 VIPR1P32241 457 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 ZDHHC20Q5W0Z9 365 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 TMC3Q7Z5M5 1100 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 SCG3Q8WXD2 468 aaKnown RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 COQ10AQ96MF6 247 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 XAB2Q9HCS7 855 aaKnown RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 NCKAP1Q9Y2A7 1128 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 EFCAB8A8MWE9 144 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MID1O15344 667 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 TTI1O43156 1089 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 LAMTOR5O43504 91 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 CYP2A6P11509 494 aaPredicted RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 DPP6P42658 865 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 PDE1BQ01064 536 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 SIRPB2Q5JXA9 342 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 CAMK1DQ8IU85 385 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MMAAQ8IVH4 418 aaKnown RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 DENND6BQ8NEG7 585 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 OR2T34Q8NGX1 318 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 SPATA22Q8NHS9 363 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 GAB3Q8WWW8 586 aa13.34□□□□□ -0.27
USP44-202ENST00000393091 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
USP44-202ENST00000393091 H7C0S8 307 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 SP9P0CG40 484 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 GM2AP17900 193 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ADPRHP54922 357 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ZNF449Q6P9G9 518 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 GSTA5Q7RTV2 222 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 TTC30BQ8N4P2 665 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 AXIN1O15169 862 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 MT-CYBP00156 380 aaPredicted RBP13.33□□□□□ -0.28
USP44-202ENST00000393091 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 CD6P30203 668 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 ABL2P42684 1182 aa13.33□□□□□ -0.28
USP44-202ENST00000393091 PSMD8P48556 350 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms