RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PHTF2Q8N3S3 785 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RDM1Q8NG50 284 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ST8SIA2Q92186 375 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GAD1Q99259 594 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TINF2Q9BSI4 451 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MLPHQ9BV36 600 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MCCC2Q9HCC0 563 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CUEDC1Q9NWM3 386 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 HSPBP1Q9NZL4 362 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CCDC167Q9P0B6 97 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MBD2Q9UBB5 411 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ENPP5Q9UJA9 477 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ROBO1Q9Y6N7 1651 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FAM92AA1XBS5 289 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 STX16-NPEPL1H3BU86 382 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ABCB7O75027 752 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SGPL1O95470 568 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ATP6V1B2P21281 511 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SRP54P61011 504 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FSTL1Q12841 308 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 HSD17B12Q53GQ0 312 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RHBDF2Q6PJF5 856 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TRIM72Q6ZMU5 477 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SAMD7Q7Z3H4 446 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZFPM1Q8IX07 1006 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CLYBLQ8N0X4 340 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PACRGLQ8N7B6 248 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 KBTBD8Q8NFY9 601 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SLC35C1Q96A29 364 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RNF145Q96MT1 663 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FUNDC2Q9BWH2 189 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SFMBT1Q9UHJ3 866 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 GMEB2Q9UKD1 530 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PDE10AQ9Y233 779 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 MICAL3Q7RTP6 2002 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CCDC78A2IDD5 438 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF99A8MXY4 864 aaPredicted RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 EI24O14681 340 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SCO2O43819 266 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CD40LGP29965 261 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 HLCSP50747 726 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ACTR2P61160 394 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 IL18R1Q13478 541 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PTPN20Q4JDL3 420 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CYP4A22Q5TCH4 519 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 PYHIN1Q6K0P9 492 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CFAP77Q6ZQR2 320 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF438Q7Z4V0 828 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CERS5Q8N5B7 392 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 DCAF4Q8WV16 495 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TFB1MQ8WVM0 346 aaKnown RBP7.67□□□□□ -1.18
VTI1A-201ENST00000393077 CPA5Q8WXQ8 436 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 SLCO2A1Q92959 643 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF597Q96LX8 424 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FAM213AQ9BRX8 229 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 C1QTNF1Q9BXJ1 281 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 TBC1D13Q9NVG8 400 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 RIMS3Q9UJD0 308 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 DNMT3LQ9UJW3 386 aa7.67□□□□□ -1.18
VTI1A-201ENST00000393077 FAM205AQ6ZU69 1335 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 BCL9LQ86UU0 1499 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 TCRBV9S1A1TA0A576 114 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 C2orf81A6NN90 581 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 E5RJQ4 531 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 H3BMM5 538 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 E2F3O00716 465 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CST8O60676 142 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 UPK1BO75841 260 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CYP7B1O75881 506 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 DNAJB5O75953 348 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 APOA4P06727 396 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 ROR1Q01973 937 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 RHDQ02161 417 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 ELOAQ14241 798 aaKnown RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 TPRG1LQ5T0D9 272 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 METTL3Q86U44 580 aaKnown RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 ZDHHC13Q8IUH4 622 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CAMKK1Q8N5S9 505 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 OR2T34Q8NGX1 318 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 OR2T3Q8NH03 318 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 RIT1Q92963 219 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CENPNQ96H22 339 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CAMKK2Q96RR4 588 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 SLC29A1Q99808 456 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 WDR55Q9H6Y2 383 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 RAVER2Q9HCJ3 691 aaKnown RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 FAM49BQ9NUQ9 324 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 SMOXQ9NWM0 555 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 TNFRSF10DQ9UBN6 386 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 SLC9A2Q9UBY0 812 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 ZNF70Q9UC06 446 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 GINS2Q9Y248 185 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CYP3A7-CYP3A51PA0A087WV96 503 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 C7orf72A4D263 438 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 K7ENM7 598 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 PLATP00750 562 aa7.66□□□□□ -1.18
VTI1A-201ENST00000393077 MBL2P11226 248 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-201ENST00000393077 CYP3A7P24462 503 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms